Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2601 ATGGATGCCAACGACCCCAAGCTTTTGAAGACCAGGCTTGAGCGCCGAAACGCCATGAAGAACATCGATTACCAAGCCCCCACCACTACGTCGTACGACGACGTTGTTTCTCTCGACCTTTTAGGTCAAACCAGCTTCAGGGTAAAGGGTTTGGACGGTGAGTTCGACCTTCTTTTTCGCACTTTAGGACTTTCTGGTCCCGAAGACTTCGAAATCCCTACTGCAGAATGGAAAGCCCGAGAGATTCACTCTGTCCATAATAATAGTAACCCACTGGGTAAAAAGGCACGAGATGAAATTCAAATTTCGGCTGAATTTGAACGCCGGGTTGAAATTAATAGTGATATAGAGCTAAAGGGTAAGAAATATCAACCTGAGGTGGAAAGGAAGATTATGGTTGCTCATTCTAATTCGAATGCTTTGGGGTCCAATCAAGATGGTGGTAGAGGAATCAGAAGTGTTAGGCCTTCTGTTCTATTGCCGCCGCCGAGGATGGTGCCGAAGCCAATTGTTGATAGGGTTATTGATTCAAGAGTTCAAGTTAGGGGCATTATTTCTTCTGTTGAAGATGAAGTGAGGGTCCTTGAAGGAAATGAGGAGGGTGGTGGTGATAAGGGTAGTGATGTGGTTGATGAGTCGGTTCATAATGTCTCACCATATGGGTCATTTAGATGCACTTTCTCCTCTTGGCAAAAGGGAGAGATTCTGGGAAAGGGGTCATTTGGTACAGTTTATGAAGGCTTTACAAGTGATGGGTTCTTCTTTGCCGTGAAGGAAGTTTCTTTGCTGGATCAAGGAAGCCAGGGAAAACAGAGCATTTTCCAACTTCAGCAGGAAATAGCTCTATTGAGTCAGTTTGAACATGAAAACATAGTTCGATATCTTGGCACAGACAAGGATGAAAGTACGCTATATATATTCCTTGAGCTTTTAACAAAAGGGTCATTGGCAAATCTCTATCGAAAGTATCATTTAGTGGATTCACAAGTCTCTGCATACACACGGCAGATTTTAAGTGGCTTGAAGTATCTTCATGATTGTAATGTGGTTCACAGGGACATCAAGTGTGCTAATATTTTGGTTGATGCAAGTGGATCAGTAAAGCTTGCAGATTTTGGATTGGCAAAGGCAACTAAATTTAATGATCTTAGATCAAGCAAAGGCTCCCCTTACTGGATGGCCCCTGAGGTTGTAAATTTAAAGAGCCATGGTTATGGACCAGCAGCTGATATATGGAGCCTAGGATGTACGGTTTTGGAGATGTTGACACGACGGCCTCCTTACTCTGAATTGGAAGGGATGCAAGCATTGTTTCGGATTGGCAAAGGTGAACCCCCGCCAATTCCTGAGTCAATATCAAAAGATGCCCGAGATTTTATTCATAGTTGCATACAAGTGAACCCTGAGAAACGGCCAACTGCAGCTACGTTGTTGGAACATACATTTGTAAAAAGAAAATTCATGCCTCCAATAAGTCCCGCTTCTCCGCTTGTTAATGATTTTCAGTCTTGA 1512 0.4332 MDANDPKLLKTRLERRNAMKNIDYQAPTTTSYDDVVSLDLLGQTSFRVKGLDGEFDLLFRTLGLSGPEDFEIPTAEWKAREIHSVHNNSNPLGKKARDEIQISAEFERRVEINSDIELKGKKYQPEVERKIMVAHSNSNALGSNQDGGRGIRSVRPSVLLPPPRMVPKPIVDRVIDSRVQVRGIISSVEDEVRVLEGNEEGGGDKGSDVVDESVHNVSPYGSFRCTFSSWQKGEILGKGSFGTVYEGFTSDGFFFAVKEVSLLDQGSQGKQSIFQLQQEIALLSQFEHENIVRYLGTDKDESTLYIFLELLTKGSLANLYRKYHLVDSQVSAYTRQILSGLKYLHDCNVVHRDIKCANILVDASGSVKLADFGLAKATKFNDLRSSKGSPYWMAPEVVNLKSHGYGPAADIWSLGCTVLEMLTRRPPYSELEGMQALFRIGKGEPPPIPESISKDARDFIHSCIQVNPEKRPTAATLLEHTFVKRKFMPPISPASPLVNDFQS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2601 503 ProSiteProfiles Protein kinase domain profile. 230 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2601 503 FunFam Mitogen-activated protein kinase 1, putative, expressed 228 495 - -
Acco06g2601 503 SUPERFAMILY Protein kinase-like (PK-like) 212 496 IPR011009 -
Acco06g2601 503 ProSitePatterns Protein kinases ATP-binding region signature. 236 258 IPR017441 GO:0005524
Acco06g2601 503 Pfam Protein kinase domain 231 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2601 503 Gene3D Phosphorylase Kinase; domain 1 211 311 - -
Acco06g2601 503 Gene3D Transferase(Phosphotransferase) domain 1 312 489 - -
Acco06g2601 503 ProSitePatterns Serine/Threonine protein kinases active-site signature. 349 361 IPR008271 GO:0004672|GO:0006468
Acco06g2601 503 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 156 486 - -
Acco06g2601 503 SMART serkin_6 230 483 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2601 Acco-ChrAcco06 24597463 24603829 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2601 12 485 MAP Kinase Kinase Kinase AT4G08500 44.602 1.11e-133 398
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Acco06g2601 Pkinase 4.1e-69 CL0016