Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2540 ATGCCCATAAGCGAGCTTTTGTTGAATTGTGAGGAAGCGAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAGGGGATGGATAAGTACGAGCTAGTGAAGGACATAGGATCTGGGAATTTCGGGGTGGCCAAGCTGATGCGAAATAAAGAAACCAAGGAGCTTGTTGCCATGAAATACATTGAACGAGGTCACAGGATCGATGCCAATGTAGCCAGGGAAATCATAAACCATAGATCTCTTTGCCACCCGAACATAATTCGGTTCAAGGAGGTGTTTTTGACTCCAACGCATCTTGTAATAGTCATGGAGTATGCAGCTGGTGGAGAGCTTTTTGATCGCATTTGCACTGCTGGAAGATTCAGTGAAGATGAGGCTAGGTATTTCTTCCAGCAGCTCATCTCAGGAGTTAGCTACTGCCATACTTTGCAAATCTGCCATCGAGACTTGAAGCTGGAGAATACCTTATTGGATGGCAGCCCTGCTCCACGTCTGAAAATTTGTGATTTTGGCTATTCTAAGTCATCTCTACTTCATTCAAGGCCAAAATCAACAGTGGGAACTCCAGCCTATATTGCACCAGAGGTTCTTTTACGTAGAGAATATGATGGAAAGTTGGCTGATGTATGGTCCTGTGGAGTAACTCTTTATGTGATGCTGGTGGGGGCATACCCATTTGAGGACCCAGAAGATCCTAAAAACTTCAGAAAAACCATAAATCGGATTATGTCTATTCAATACAAGTTCCCAGAATACGTACACATATCTCAAGACTGTAAACATCTGCTATCGCGCATTTTTGTCCAAAATCCAGCAAAGAGAATAAGCATGAAAGAAATCAAGTCCCACCCATGGTTTCTAAAGAACCTGCCAAGGGAATTGACAGAAACAGCCCAAGCTGTCTACTACAAGAAAGAAAACCCAACATTTTCTCCTCAGAGTGCAGAAGACATAATGAAAATTGTTGAAGAGGCCAAACCTCCACTCTCAGATTCTAAGTCAGCCAGAGAGTTTGGTTGGGAAGAGGAAGGAGAAGAGGAAGAAGACACAACAAATGATGAGGCAAATGGTGAGGAGGAAGAGGAAGAGTGTGAAAAGAGAGTAGAGGAGGCACAGGCCAGCCGCGATGTTAATAAGGTTGTGAGTTGTAACTTCAAGTTAAGAACCAGACAGAGTTTGTGA 1185 0.4321 MPISELLLNCEEARRRRRRRRRRRKKGMDKYELVKDIGSGNFGVAKLMRNKETKELVAMKYIERGHRIDANVAREIINHRSLCHPNIIRFKEVFLTPTHLVIVMEYAAGGELFDRICTAGRFSEDEARYFFQQLISGVSYCHTLQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSLLHSRPKSTVGTPAYIAPEVLLRREYDGKLADVWSCGVTLYVMLVGAYPFEDPEDPKNFRKTINRIMSIQYKFPEYVHISQDCKHLLSRIFVQNPAKRISMKEIKSHPWFLKNLPRELTETAQAVYYKKENPTFSPQSAEDIMKIVEEAKPPLSDSKSAREFGWEEEGEEEEDTTNDEANGEEEEEECEKRVEEAQASRDVNKVVSCNFKLRTRQSL 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2540 394 PANTHER SERINE/THREONINE KINASE 29 346 - -
Acco06g2540 394 Coils Coil 353 375 - -
Acco06g2540 394 SMART serkin_6 31 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2540 394 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Acco06g2540 394 CDD STKc_SnRK2 30 286 - -
Acco06g2540 394 Pfam Protein kinase domain 31 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2540 394 MobiDBLite consensus disorder prediction 326 377 - -
Acco06g2540 394 Gene3D Phosphorylase Kinase; domain 1 12 106 - -
Acco06g2540 394 SUPERFAMILY Protein kinase-like (PK-like) 19 317 IPR011009 -
Acco06g2540 394 ProSiteProfiles Protein kinase domain profile. 31 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2540 394 Gene3D Transferase(Phosphotransferase) domain 1 107 295 - -
Acco06g2540 394 FunFam Serine/threonine-protein kinase SRK2E 107 295 - -
Acco06g2540 394 FunFam Serine/threonine-protein kinase SRK2E 28 106 - -
Acco06g2540 394 MobiDBLite consensus disorder prediction 342 367 - -
Acco06g2540 394 MobiDBLite consensus disorder prediction 326 341 - -
Acco06g2540 394 ProSitePatterns Protein kinases ATP-binding region signature. 37 60 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2540 Acco-ChrAcco06 23093885 23098904 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2540 20 290 CBL-interacting serine-threonine protein kinases AT2G26980 42.199 2.93e-67 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Acco06g2540 Pkinase 3.7e-71 CL0016