Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2535 ATGGCTTCCATGTGTCCCCTGCCAGTTCCCGCCATTTTCGGCTCAGAGAAACTCTCTCCAGCTCCTCCTTCCCCTTCTCCTTGCGGTGATGGTCCACACTATATCTCCCTTCTGATCAAGCGTTTTCTGAATCCAAGATTTGTTGTTCTTTTATATGTTGATTTTCTCTCTTCTTCGATTTTCCGGCTTAACTTCCTCGTATCGTTTCCAGTTGAAGTGAGCAGTCAAGGTGACAAGCCCAAGAAGGATGGGCCTAAATTTGGCTTTAAAGAACCAACTTTTTTGTATGGTGATTTGGATCTCTATGTATTAGAAGCAAAATATCTTCCAAATTTGGATCTTTCTTCTGAAACAGTGAGAAAATGTTTAACAATGGGTAATACTTGTACCCCACCCTTCATGAAAGCACACATTGTAAGCGCTGGGAAATATAATGTAAATACTAGTGATCCCTATGTCTCTGTCGTTGTGGCGGGGGCTACTGTAGCTCAAACACGAGTAGTTCGTGACAATGAGCATCCTTCATGGGATGAGCATTTTATTGTTCCAGTGGCTCACCCTGCTGAGAAAGTGGAGTTTATCGTGAAAGATGATGATGCTCTTGGGGCTGACGTCATTGGAGCTGTAGAGATACCTGTTCAGAAGATTTTGTCTGGAAATACTATTAATGATTGGTTTCCGATTTCCATTACGGGTGGATTCTCTATTTGCTCAAAAGGTACTCCTAAGTTACATATCTCCATTCAGTATAAGCCATTCGGAGCAAACCCTTCAGACAAACGTGGCATTGGAGCTGTGGCAGATCATCCAGGTGTTCCTAACACATATTTTCCACTTAGAAAAGGAGGGAAAGTGACTCTTTATCAAGATGCACATGTACCAGATGGTAGATTACCTGAAATTTCACTTGAGGAGGGAAAAGTCTTTCAGCAGAGTAAATGTTGGGAGGATATTTGCCATGCAATTTTGGAAGCTCGTGAACTGATATACATTGTAGGATGGTCTGTTTATCACCCTGTAAAGCTTGTCAGAGAACCAACAAGACCCTTACCTGCTGGAGGAGAGCTTTCACTTGGAGAGTTATTGAAATATAAGTCACAAGAAAATGTCCGCGTGGTTATGCTGATCTGGGATGACAAAACTTCGCATGACAAATTTTTTTTGAAAACAGATGGTGTCATGCAGACCCATGATGAAGAAACTAAGAAATTTTTTAAACACTCTACTGTTCATTGTGTGCTTGCGCCACGTTATGCGAGCAATAAGCTCAGTATTTTCAAGCAACAGGTTGTTGGAACCCTTTTTACACATCATCAGAAGTGTGTGATACTTGACACTCACGCCTATGAGGATAAACGGAAATTAACTGCTTTTATAGGTGGTCTAGATCTATGTGATGGCAGATATGATACTCCTGATCACCGGCTCTTTATTGATTTAGACACTATCTTTGAGAATGATATTCATAATCCAGTATTCCTTTCAAATACTGGAGTACCAAGGGAACCATGGCATGACCTACATTGTAAAGTTGAGGGTCCAGCTGCATATGATATATTGACCAATTTTGAACAAAGATGGAGGAAAGCCAAAAAGTTGCGTGAATTCAAGCTAAAAAGGGTGACAAATCGGCATGATGATGCTTTGCTAAGGTTAGAACGTATTCCATGGATTCTAACTCCATCATCTGGTGCTGTTGGTGACCAAGTTGTTCAGGTAACTGAAGAGGATGATCCAGAAAGCTGGAATGTGCAGGTGTTTCGGTCCATAGATTCAGGATCCATTAAGGGTTTTCCAAAGGATATGGACCAAGCTAAGGCTCAGCATCTTCTCTGCGGAAAGAACTTAAAAGTAGACAAAAGCATCCATACCGCTTATGTAAAAGTAATAAGATCGGCCCAACGCTTCATATATATTGAGAATCAATATTTTCTGGGATCCTCATATAATTGGCCTTCATATCAACATGCAGGTGCTGATAACTTGGTTCCGATGGAGTTAGCTCTGAAAATTGTCAACAAGATCAATGCAAATGAACGGTTTTCTGTCTATGTTGTCATACCAATGTTTCCAGAGGGGCCTCCAGCTAGTAAAGCTGTGCAGGAAATCTTGTTCTGGCAGGGACAGACAATGTCTATGATGTATGGCATTGTCGCTGATGCCCTTAAACGAAAAGGTCTATCTGATAAATATCATCCCCAAGATTATCTCAACTTTTATTGCCTTGGAAAGCGTGAACCTCAATCCAGTAATAGTTCGATATCTGTGCAAACAGCTGATCGTGCTCTGGCATCGGTTTACAAATATAGACGTTTCATGATTTATGTTCATGCCAAAGGAATGATAGTTGATGATCAATTCGTAATCCTGGGATCTGCAAATATTAACCAAAGATCCTTGGACGGTTCAAGGGACACAGAGATTGCTATGGGTGCCTATCAGCCTCACAATACATGGGCAAGAAAAAATTCTCATCCACATGGTCAGGTGTATGGTTACAGAATGTCACTGTGGGCTGAGCACCTTGGTGGTCTAGAGGATTCTTTCAAGGAACCAGACAACCTTGAATGTGTTCGGCGAGTGAACAAAATCGCCAAGAGTAACTGGGACGCGTATGTATCTGAGGAAGAGAAGGAGATGAGAGGGCACCTGATGCTGTATCCAGTTCAGATTGGCAATGATGGAAGAGTTAGTGCCTTGAAAGATTGGGAAAACTTCCCTGATGTTGGGGGTAAAATTCTTGGATCACCCAATGCTCTTCCTGATACACTAACCACATAA 2781 0.4168 MASMCPLPVPAIFGSEKLSPAPPSPSPCGDGPHYISLLIKRFLNPRFVVLLYVDFLSSSIFRLNFLVSFPVEVSSQGDKPKKDGPKFGFKEPTFLYGDLDLYVLEAKYLPNLDLSSETVRKCLTMGNTCTPPFMKAHIVSAGKYNVNTSDPYVSVVVAGATVAQTRVVRDNEHPSWDEHFIVPVAHPAEKVEFIVKDDDALGADVIGAVEIPVQKILSGNTINDWFPISITGGFSICSKGTPKLHISIQYKPFGANPSDKRGIGAVADHPGVPNTYFPLRKGGKVTLYQDAHVPDGRLPEISLEEGKVFQQSKCWEDICHAILEARELIYIVGWSVYHPVKLVREPTRPLPAGGELSLGELLKYKSQENVRVVMLIWDDKTSHDKFFLKTDGVMQTHDEETKKFFKHSTVHCVLAPRYASNKLSIFKQQVVGTLFTHHQKCVILDTHAYEDKRKLTAFIGGLDLCDGRYDTPDHRLFIDLDTIFENDIHNPVFLSNTGVPREPWHDLHCKVEGPAAYDILTNFEQRWRKAKKLREFKLKRVTNRHDDALLRLERIPWILTPSSGAVGDQVVQVTEEDDPESWNVQVFRSIDSGSIKGFPKDMDQAKAQHLLCGKNLKVDKSIHTAYVKVIRSAQRFIYIENQYFLGSSYNWPSYQHAGADNLVPMELALKIVNKINANERFSVYVVIPMFPEGPPASKAVQEILFWQGQTMSMMYGIVADALKRKGLSDKYHPQDYLNFYCLGKREPQSSNSSISVQTADRALASVYKYRRFMIYVHAKGMIVDDQFVILGSANINQRSLDGSRDTEIAMGAYQPHNTWARKNSHPHGQVYGYRMSLWAEHLGGLEDSFKEPDNLECVRRVNKIAKSNWDAYVSEEEKEMRGHLMLYPVQIGNDGRVSALKDWENFPDVGGKILGSPNALPDTLTT 926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2535 926 Gene3D Endonuclease Chain A 563 824 - -
Acco06g2535 926 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 95 252 IPR035892 -
Acco06g2535 926 Pfam Phospholipase D C terminal 846 916 IPR024632 -
Acco06g2535 926 Pfam PLD-like domain 761 808 IPR025202 -
Acco06g2535 926 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 433 468 IPR001736 GO:0003824
Acco06g2535 926 Gene3D Endonuclease Chain A 304 552 - -
Acco06g2535 926 FunFam Phospholipase D delta 305 548 - -
Acco06g2535 926 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 772 799 IPR001736 GO:0003824
Acco06g2535 926 Pfam Phospholipase D Active site motif 434 468 IPR001736 GO:0003824
Acco06g2535 926 CDD C2_plant_PLD 92 250 - -
Acco06g2535 926 PANTHER PHOSPHOLIPASE D 94 915 IPR015679 -
Acco06g2535 926 SMART pld_4 772 799 IPR001736 GO:0003824
Acco06g2535 926 SMART pld_4 433 468 IPR001736 GO:0003824
Acco06g2535 926 SUPERFAMILY Phospholipase D/nuclease 620 853 - -
Acco06g2535 926 Gene3D C2 domain 96 260 IPR035892 -
Acco06g2535 926 SMART C2_3c 98 225 IPR000008 -
Acco06g2535 926 PIRSF PLD_plant 87 926 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Acco06g2535 926 ProSiteProfiles C2 domain profile. 79 226 IPR000008 -
Acco06g2535 926 Pfam C2 domain 97 228 IPR000008 -
Acco06g2535 926 SUPERFAMILY Phospholipase D/nuclease 275 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2535 Acco-ChrAcco06 22989906 23001025 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2535 94 925 Phospholipase D Gene Family (Wang group) AT4G11850 53.318 0.0 905