Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2532 ATGGCCGTACATTCAAAGCTCAAGCTTATTTGTTACTCACAAGATATTGTAGATGGGCAGCCGATTTTTGTTTCTTCAAATTGTACTCCTGTCAAGGCTTTGAAATTTGAACCAGCAGGTCACGCCTTTCATTCTGCTGCACTTAAACTACTTGGTGTTGAGGAAGAAAATTTAGACGCTGATGATAAAAAGGTTGTTGATGATAATGAACAAAATTATTTTCCATCTGACTCTTATAGCAGCAAAAGCAAAAAGAAATCTGGTTCTGGAGACAAGCAACAAGATCACTATGCATTGTTAGGTTTAGCCCATCTAAGATACCTTGCTACAGAGGATCAAATACGTAAAAGTTATCGTGAAACTGCTTTGAGGTATCATCCTGACAAACAGGCAGCTCTACTTCTTGCTGAGGAGACTGAAGCTGCAAAGCAGGCAAAGAAGGATGAGGTAGAAAGTCATTTTAAGGAAATACAGGAAGCATATGAAGTTTTGATTGATCCTGTGAAGAGAAGAATCTATGATTCCACAGACGAGTTTGATGATGAGATCCCTACTGACTGCGCCCCACAGGACTTCTTCAAAGTGTTCGGTCCTGCATTTATGAGGAATGGTAGGTGGTCAGTTAACCAACCTGTTCCTTCTTTAGGTGAAAACAACACTCCATTAAAAGAAGTGGATAATTTCTACAATTTCTGGTACACCTTTAAAAGCTGGAGGGAGTTTCCTCAAACTGATGAATTTGATATTGAGCAAGCTGAATCTCGGGACCACAGGAGGTGGATGGAAAGGCAGAATGCAAAATTGTCAGAAAAAGCAAGGAAGGAAGAATCTGCACGAGTACGTGCTCTTGTTGATAATGCTTATAAGAGAGACCCTAGAATACTGAAGAGGAAGGAAGAGGAAAAGGCTGAGAAGCAAAGAAAAAAGGAGGCTAAGTTTCTTGCAAAGAGGTTGCAGGAAGAAGAAGCTGCCAGAATTGCAGAAGAGGAGAAGCAGCGCAAGGAGGAGGAAGAGAAGCGAGCTGCAGAAGCTGCTTTACAACAGAAGAAGTTGAAGGAAAAAGAGAAAAAGCTGTTGCGAAAAGAGCGTGCTCGTCTTCGAACACTTTCAGGACCTATTGTGTCACAAAATTTAATTGGTATATCTGAGGATGATGTAGAAAGTCTTTGCATGTCACTTGATACCGAGCAACTGAGGTGTTTGTGTGAGAAAATGGATGGCCTGCAGATTTCAGAACAAACAAATGTTCTCAGAGATGCACGTGATTGCAAAAATGATGGAGAAAATAAGAAAGAAGAAACAACTAATCAACAGAATGGTTCAGTTAAGGCTAATGGCAGTGCTTCTGTCTCACATGGAAACTTGGAGAAGAAGGAAAAACCTTGGAGTAAAGAAGAAGTTGATCTATTAAGAAAGGGAATGGTAAAATATCCCAAAGGAACTTCACGAAGGTGGGAGGTTGTTTCAGAGTACCTTGGTACTGGACGGTCGGTGGAAGAAATAATGAAGGCAACTAAAACTGTACTCCTCCAGAAGCCTGATTCTTCCAAATCCTTTGATGCATTTCTTGAGAAAAGGAAACCCGCACAATCAATTGCATCTCCATTGACAACTAGAGCAGAATTAGAAGGGGAATCAACTCTGGCGATATCCCAAAGTAATGCTCCCTCAACAACAAATAACAACTCTGAAGACTCTATCAGCAAAGTCGCTGACAGCCAAGCCTCTCCTGGTTCTTCTGTTACTGCAAATGGAGTACCCTCTAGTTCAGACCAAGATGACTGGTCAGCTGTACAGGAGAGAGCATTGGTTCAGGCTTTGAAAGCCTTCCCAAAGGAAACTCCCCAGAGATGGGAAAGGGTTGCAGCAGCTGTCCCTGGAAAGACTATGAACCAGTGCAAGAAAAAAATTGCAATGATGAAGGAGAGCTTTAGAAGCAAGAAAAATGCAGTTTGA 1956 0.4156 MAVHSKLKLICYSQDIVDGQPIFVSSNCTPVKALKFEPAGHAFHSAALKLLGVEEENLDADDKKVVDDNEQNYFPSDSYSSKSKKKSGSGDKQQDHYALLGLAHLRYLATEDQIRKSYRETALRYHPDKQAALLLAEETEAAKQAKKDEVESHFKEIQEAYEVLIDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPVPSLGENNTPLKEVDNFYNFWYTFKSWREFPQTDEFDIEQAESRDHRRWMERQNAKLSEKARKEESARVRALVDNAYKRDPRILKRKEEEKAEKQRKKEAKFLAKRLQEEEAARIAEEEKQRKEEEEKRAAEAALQQKKLKEKEKKLLRKERARLRTLSGPIVSQNLIGISEDDVESLCMSLDTEQLRCLCEKMDGLQISEQTNVLRDARDCKNDGENKKEETTNQQNGSVKANGSASVSHGNLEKKEKPWSKEEVDLLRKGMVKYPKGTSRRWEVVSEYLGTGRSVEEIMKATKTVLLQKPDSSKSFDAFLEKRKPAQSIASPLTTRAELEGESTLAISQSNAPSTTNNNSEDSISKVADSQASPGSSVTANGVPSSSDQDDWSAVQERALVQALKAFPKETPQRWERVAAAVPGKTMNQCKKKIAMMKESFRSKKNAV 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2532 651 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 9 650 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Acco06g2532 651 Coils Coil 301 369 - -
Acco06g2532 651 Coils Coil 136 156 - -
Acco06g2532 651 Gene3D - 587 651 - -
Acco06g2532 651 Gene3D - 455 512 - -
Acco06g2532 651 CDD SANT 595 636 IPR001005 -
Acco06g2532 651 ProSiteProfiles Myb-like domain profile. 587 636 IPR001005 -
Acco06g2532 651 SMART sant 591 643 IPR001005 -
Acco06g2532 651 SMART sant 458 511 IPR001005 -
Acco06g2532 651 Gene3D DnaJ domain 91 209 IPR036869 -
Acco06g2532 651 FunFam Myb family transcription factor 589 649 - -
Acco06g2532 651 CDD SANT 461 503 IPR001005 -
Acco06g2532 651 CDD DnaJ 95 166 IPR001623 -
Acco06g2532 651 ProSiteProfiles Myb-like domain profile. 454 509 IPR001005 -
Acco06g2532 651 MobiDBLite consensus disorder prediction 252 274 - -
Acco06g2532 651 MobiDBLite consensus disorder prediction 421 463 - -
Acco06g2532 651 MobiDBLite consensus disorder prediction 434 452 - -
Acco06g2532 651 Pfam DnaJ domain 95 174 IPR001623 -
Acco06g2532 651 ProSiteProfiles dnaJ domain profile. 95 177 IPR001623 -
Acco06g2532 651 MobiDBLite consensus disorder prediction 532 595 - -
Acco06g2532 651 PRINTS DnaJ domain signature 100 118 IPR001623 -
Acco06g2532 651 PRINTS DnaJ domain signature 149 169 IPR001623 -
Acco06g2532 651 PRINTS DnaJ domain signature 118 133 IPR001623 -
Acco06g2532 651 ProSitePatterns Nt-dnaJ domain signature. 154 173 IPR018253 -
Acco06g2532 651 SUPERFAMILY Chaperone J-domain 93 201 IPR036869 -
Acco06g2532 651 SUPERFAMILY Homeodomain-like 460 504 IPR009057 -
Acco06g2532 651 SMART dnaj_3 94 169 IPR001623 -
Acco06g2532 651 MobiDBLite consensus disorder prediction 62 92 - -
Acco06g2532 651 SUPERFAMILY Homeodomain-like 593 646 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2532 Acco-ChrAcco06 22837539 22839494 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2532 96 295 C2H2 Transcription Factor Family AT1G74250 30.126 1.51e-20 94.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Acco06g2532 DnaJ 2.9e-18 CL0392