Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Acco06g2524 | ATGGGTAAAAATAAGTGTAAGGGTCTTCTCTCCTTTCGATCCTCAAGCCTACGCCGTCGCCCAAAGAAGGCGGCTGATCATCGGTCACTACAATCGCCGCAGCAGGCGGTTGGAACTGTCGGCTCCCCTGGTGGGGGTGGCGGTGGGGCGGTGGTAAAGACCAAGAAGAAGGCCGGCGTCCCGAGGTTGTGGATGAGGTTTAATCGGTCCGGTCAATCGGAGCTTGTTGAGTTGGATAAGAACGCCATTATCAGAATCGCGGCGATTCCGGCCAGGGATCTGAGAATCTTAGGCCCTATCTTCTCTCACTCCTCCAATATCCTTGCCAGGGAGAAAGCAATGGTTGTCAATTTGGAGTTTATAAAGGCCATAGTCACAGCTGAAGAAGTCCTTGTTCTTGACCCTCTTTCCCATGAGGTTCTTCCATTTGTTGAACAACTCAGGCAACAAGTTCCATATAAAACCCAGACAAAACTTCATGGCCATGCAGAAGAGCAAGAAAAAGAACCGCTTGTTTCAACTGGTAGACAATGGTTACCAGTACCAGAGTTCACAGATGGTTTGCAGGCTGAGCTTCCATTTGAGTTTCAAGTCCTGGAGATTGCTTTAGAAGTTGTCTGTACATATCTGGACTCGAATGTGGCAGACCTTGAGAAAGGTGCTTACCCTGTATTGGACGCATTGGCTATAAACGTTAGCACCAAGAACCTTGAACACGTGCGAAGCTTGAAAAGCAACCTTACACGTTTGCTGGCACGTGTGCAAAAGGTGCGGGATGAAATTGAACATCTTCTAGATGACAACCATGATATGGCACAATTGCATTTGACGAGGAAGTGGTTGCAGTATCAGCAATCTGAGGTTAACTTGGGAGCCATGGCCTCAAATGCCCTTGCTACTGCCCTTGTTCCTCTCCATGGCTCTAACAGAAGTGGAAGTCTTGTGACTAGCAATGCCATGGATGATTCTGATGTTGAGGATCTGGAGATGTTGCTTGAGGCATATTTTATGCAGTTGGATGGAACTCGGAACAAGATATTATCTGTGAGGGAGTATATTGACGACACAGAGGACTTTGTCAACATCCAACTTGACAGCCATAGAAATGAACTTATTCAGCTTCAGTTGACCCTGACCATTGCATCATTTGCCGTTGCTTTTGAGACTTTGATTGCTGGCATGTTTGGTATGAACATCCCTTGTACATTATACAAAACTCACGGGCTTTTCTGGCCATTTGTTGGGGGCATTACTGCAGCTAGCATATTGGTTTTCTTTATTGTTTATGGATATGCAAGATGGAAAAAGTTGCTTGGTTCTTGA | 1323 | 0.4626 | MGKNKCKGLLSFRSSSLRRRPKKAADHRSLQSPQQAVGTVGSPGGGGGGAVVKTKKKAGVPRLWMRFNRSGQSELVELDKNAIIRIAAIPARDLRILGPIFSHSSNILAREKAMVVNLEFIKAIVTAEEVLVLDPLSHEVLPFVEQLRQQVPYKTQTKLHGHAEEQEKEPLVSTGRQWLPVPEFTDGLQAELPFEFQVLEIALEVVCTYLDSNVADLEKGAYPVLDALAINVSTKNLEHVRSLKSNLTRLLARVQKVRDEIEHLLDDNHDMAQLHLTRKWLQYQQSEVNLGAMASNALATALVPLHGSNRSGSLVTSNAMDDSDVEDLEMLLEAYFMQLDGTRNKILSVREYIDDTEDFVNIQLDSHRNELIQLQLTLTIASFAVAFETLIAGMFGMNIPCTLYKTHGLFWPFVGGITAASILVFFIVYGYARWKKLLGS | 440 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Acco06g2524 | 440 | PANTHER | RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL | 36 | 438 | IPR039204 | - | |
| Acco06g2524 | 440 | MobiDBLite | consensus disorder prediction | 1 | 53 | - | - | |
| Acco06g2524 | 440 | CDD | Mrs2_Mfm1p-like | 64 | 437 | IPR039204 | - | |
| Acco06g2524 | 440 | Coils | Coil | 240 | 267 | - | - | |
| Acco06g2524 | 440 | SUPERFAMILY | Magnesium transport protein CorA, transmembrane region | 376 | 427 | IPR045863 | - | |
| Acco06g2524 | 440 | Gene3D | Magnesium transport protein CorA, transmembrane region | 137 | 371 | - | - | |
| Acco06g2524 | 440 | Pfam | CorA-like Mg2+ transporter protein | 241 | 428 | IPR002523 | GO:0016020|GO:0030001|GO:0046873|GO:0055085 | |
| Acco06g2524 | 440 | Gene3D | - | 51 | 135 | - | - | |
| Acco06g2524 | 440 | FunFam | magnesium transporter MRS2-4 | 139 | 371 | - | - | |
| Acco06g2524 | 440 | FunFam | Magnesium transporter MRS2-1 | 52 | 135 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Acco06g2524 | Acco-ChrAcco06 | 22765060 | 22768477 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Acco06g2524 | 7 | 440 | MRS2 Gene Family | AT3G58970 | 63.535 | 0.0 | 534 |