Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2515 ATGGAATACGTTAGGTGCTCAGCAGAGGCACAACACAATAGAGGCAAAATATTCAAACGAGGGAAGGATGCTGTCCTAACAAGTCACTCAATAGCGACGATCTGGAATCTTCAATCTGCAAAAGGTATTATTTCTACTTCTATGGCAAATTCAAAGGCTTCATCAGGCATGAGAAATTTTATGTATTCTGGAAAGCACGCTCTCCTTCCTCCTAAAAGTCCATTTCCTAGTATTTCTGGAGCATATGCTGATTATGTCCCAAATGCCGCTTTTGGTTCCAAGGTTGTTCAGAAACCGAGAGGGGGAAGCTCCAACCACCAACGGACTTCATCTGAGAGCCTTGTCATCGAGGAACAACCTTCTTGGCTTGATGATCTTCTTAATGAGCCAGATACGCCAATCCGTAAGGGTGGGCATCGGCGTTCATCAAGTGATTCTTTTGCTTACTTAGACACAGTTAATGTTTCTTCTAACATTAGCTATACAGATCAGGATGAGTACAATTATAAGAATTTAAAATCGATTCCATCTTGGGCATCTCAGGACTTTGATTATGGCAAAGATGCTCGTCATTTGCCAATGTATGCAGAAATCAAGTCAACCAAAAAGAACAATAGAGTGTGGGACTCTTCTTTAAATGTTGTCTTGCTTCCAAGTGGTGTACCCTCTGTCCGGGACAATGGTGCATTTCAGAGTTCAGGATCACTTGGCATGCCATGTGAAGAACTAGACGGGGTTACATCAAATGCTAATGAAAAACTGGATTCAGCAGAATCTAGCTCACATGATACAAAAGTATCTTCTAAAAATAAGGATGGTTCGCATGCAAAGGCACATGCTTCTGAAACAGATACAAAACGAGCTAAACAGCAATTTGCTCAACGTTCACGGGTTCGTAAACTACAGTACATAGCTGAGCTGGAAAGAAACGTACAAGCTTTACAGGCAGAAGGGTCTGAAGTATCAGCTGAGGTTGAATTTCTTAATCAACGGCATCTTATCCTGAGCATGGAGAACAAAGCCCTTAATCAACGTCTAGAAAGTTTAGCACAGGAGCATCTTATCAAACGCTTGGAGCAGGAAGTACTAGAAAGAGAGATTGCCAGATTACGTGCGTTACATCAGCAGCAGCAGCAACCACAGCAACAGCAACCATCTGGTAGCCTCCGACGCACTAAGAGCGAAGACCTTGATTCCCAATTTTCAAACCTTTCCTTAAAACATAAAGACAGCAGTTCAGGGCGCGACTCCATGACAGGTCCAGTCCGTACTTAG 1275 0.4282 MEYVRCSAEAQHNRGKIFKRGKDAVLTSHSIATIWNLQSAKGIISTSMANSKASSGMRNFMYSGKHALLPPKSPFPSISGAYADYVPNAAFGSKVVQKPRGGSSNHQRTSSESLVIEEQPSWLDDLLNEPDTPIRKGGHRRSSSDSFAYLDTVNVSSNISYTDQDEYNYKNLKSIPSWASQDFDYGKDARHLPMYAEIKSTKKNNRVWDSSLNVVLLPSGVPSVRDNGAFQSSGSLGMPCEELDGVTSNANEKLDSAESSSHDTKVSSKNKDGSHAKAHASETDTKRAKQQFAQRSRVRKLQYIAELERNVQALQAEGSEVSAEVEFLNQRHLILSMENKALNQRLESLAQEHLIKRLEQEVLEREIARLRALHQQQQQPQQQQPSGSLRRTKSEDLDSQFSNLSLKHKDSSSGRDSMTGPVRT 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2515 424 Coils Coil 297 352 - -
Acco06g2515 424 MobiDBLite consensus disorder prediction 373 424 - -
Acco06g2515 424 MobiDBLite consensus disorder prediction 252 293 - -
Acco06g2515 424 Gene3D - 286 337 - -
Acco06g2515 424 MobiDBLite consensus disorder prediction 256 291 - -
Acco06g2515 424 PANTHER BASIC-LEUCINE ZIPPER (BZIP) TRANSCRIPTION FACTOR FAMILY PROTEIN-RELATED 57 406 IPR044797 -
Acco06g2515 424 CDD bZIP_plant_RF2 284 332 IPR044759 GO:0003700|GO:0006355
Acco06g2515 424 MobiDBLite consensus disorder prediction 373 390 - -
Acco06g2515 424 SUPERFAMILY Leucine zipper domain 293 335 IPR046347 GO:0003700|GO:0006355
Acco06g2515 424 SMART brlzneu 282 341 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2515 Acco-ChrAcco06 22656928 22663269 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2515 67 356 bZIP Transcription Factor Family AT2G42380 29.195 5.92e-20 87.4