Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2488 ATGGCAGATAACACGGTAAATCTTCCTCCTGGGTTCAGATTCTGCCCCACTGATGAAGAACTGATAGTCCATTTCCTTCACAGAAAAGCTTCACTCCTACCTTGTCACCCTGATGTCATACCTGACCTTGACCTCTATCCCTACGATCCATGGGACCTCCAAGGGAAGGCTCTAGGGGAGGGAAACCAATGGTATTATTATAGCAGGAGGACTCAGAATAGGGTTACAGTGAATGGGTATTGGAAGGCAATGGGAATGGAAGAAACAGTGATTGCTGCAAACAGCAATAATAAGAGAGTTGGAATGAAGAAATATTTTGTGTTTTATGAAGGAGAATCTCCTAATTCTGGCATCAAAACCAACTGGGTAATGCAAGAGTATCGTCTTTCAGATTCTTCTTCTTCCTCCTCTAGAAGAAGATCACAACCAAAACCAGATTACAGTAAGTGGGTGATTTGTCGAGTTTATGAGCAAGATAATGACGATGATCACAGTGGTGGTGGTGGTGATAATGGAATAGAGCTATCTTGTTTGGATGAAGTGTTCTTGTCCATGGATGATCTTGAAGAAATAAGCTTACCAATTAGTTAG 591 0.4179 MADNTVNLPPGFRFCPTDEELIVHFLHRKASLLPCHPDVIPDLDLYPYDPWDLQGKALGEGNQWYYYSRRTQNRVTVNGYWKAMGMEETVIAANSNNKRVGMKKYFVFYEGESPNSGIKTNWVMQEYRLSDSSSSSSRRRSQPKPDYSKWVICRVYEQDNDDDHSGGGGDNGIELSCLDEVFLSMDDLEEISLPIS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2488 196 PANTHER NAC TRANSCRIPTION FACTOR 56 8 163 - -
Acco06g2488 196 FunFam NAC domain-containing protein 104 17 161 - -
Acco06g2488 196 Gene3D NAC domain 17 163 IPR036093 GO:0003677|GO:0006355
Acco06g2488 196 SUPERFAMILY NAC domain 4 158 IPR036093 GO:0003677|GO:0006355
Acco06g2488 196 Pfam No apical meristem (NAM) protein 9 129 IPR003441 GO:0003677|GO:0006355
Acco06g2488 196 ProSiteProfiles NAC domain profile. 8 158 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2488 Acco-ChrAcco06 22109135 22109913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2488 7 158 NAC Transcription Factor Family AT1G69490 45.000 2.34e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g2488 NAM 2.1e-32 No_clan