Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2463 ATGGGGTCTCCTCATTTTGTTCTTAAACACATTCCTTTCGTACTTCTTGCTGCACTGAACATAATTGCCTTAGCTCAGGGTGGCCTTGAAGAGATAGGTGAGATAGGTGCTCTTAAGGCTCTCTTGAGAATTTTCAATGATAGTAGTCTAAATGGTAGCTGGAAGGGTGAGCCCTGTGATAATGGTGATCAAGCAAGATGGATAGGGATACAGTGTTCAAATGGTCATGTCAGTGGTATAGAGTTGGAAGGCAGGGATTTGGTGGGAGAACTCATATTTGGTGATCCTGCATTTGCTTTGCTTCCATACTTGTCGTTCATAAACTTAAAGAACAATGCTCTAAGGGGATATATGATGGACTTGACCCACAATCCCCAAATGCGTCACATTGATCTGTCCGGCAACGAACTTGATGGGTCTATTTCTTCGTCCTTTATGGGTCTCAACCTCTTGGACACTATCCCTGAAACTCCAACTCTTCAATCATTTGGCCCTGATTCATACTCTGGAAATCAGAGATTATGTGGTCCACCTTCTCAAACTCCCTGCACTGTTAATTCTCCTCCAGCACCTGAAAATGATCCAACCAGCAGCAATGCATCCAATAAAAGTCACAATCACCACTCTATTTTATTAATTGTCGGCGTAGTTATTTTCCTTGCTGTAGCTTTGTTACTAATGATTTACTATAACTCAGTAACAAAGCTTATTAAAATAGCAAGGGGGGAAAATCCCACAGTTAGAGATGAAGAGATTGTTGGTGACCATGCACAAACAGAAGGAGAGAGAAACATGGGAGTTGAAGATCGAAACGAGCTCATATTCTTTAAGGACAGGCCTAAATTTCAAATGGTTGAACTTCTTAGCGCTTCTGCTGAGGGACTTGGTAATCAGGGAATCATGGGAAATAGTTATAAGGCTATGCTACATGGTGGACCTACTGTCGTTGTAAAGAAGCTAAGGGACTTAAAACCATTAAGTAAAGAGGAATTTGCAAAGCTACTGCATAAGATTTATGACATGGAGCACCCAAATTTGTTGCCCTTGCTTGCTTTTTCCCAAGATGGGAAGATGCTGCTCTATCAATATGCACAGAACGGAAATCTTTTCTTCCGGCTTCATGGTTGTAGAGATAGAAACCGGATACCATTCAAATGGCGCTCAAGATTATCAGTTGCAAGAGGGGTAGCTCAAGCATTGGACTACCTGCACCAGAACACCAACACCGACATCGTCCCTCATGGAAACTTGAAGTCCTCAAACATCCTCTTAGACAAAGACGACGAACCCCTTGTCTCCGACTACGGTCTCACCTCCCTCATAACCCCGCCCATAGCAACTCAACGAATGGTCGTATTCAAATCACCAGAATACGAACACGCTAAAACAGTCACGAAGCAATCTGACGTGTGGAGCTACGGCTTGCTTCTCATAGAACTTTTAACAAACAGAGTATCTGCGTCCTCGGCGCCTCCAGGGTTTAAAGGGTTCGATCTCAGTAAATGGGTTCGCAGAGAAGTGACAGAAGAATGGGCGGCTGAGATTCTCGATGCTGAGATCGCTGGAGAAAGAAAAGCTCTTCCTGGGATTCTAAGAGTGCTCGAGATAGCGATACGATGCATTGATAGGTTGCCGGAGAATCGGCCGGAGATGAGGGAGGTGTTGAGAGAATTGGAGAAGATAGAGGCTACATTACCGGCAAAAGAAGAAGAGAACGAGGAATCTGAAGATAGGTATTCTACTTCCTATGGATCTTTTTCAAACAGTTCTTCAGGGATAGTCAGAGACGACAAGTGGATGAAGTAG 1806 0.4374 MGSPHFVLKHIPFVLLAALNIIALAQGGLEEIGEIGALKALLRIFNDSSLNGSWKGEPCDNGDQARWIGIQCSNGHVSGIELEGRDLVGELIFGDPAFALLPYLSFINLKNNALRGYMMDLTHNPQMRHIDLSGNELDGSISSSFMGLNLLDTIPETPTLQSFGPDSYSGNQRLCGPPSQTPCTVNSPPAPENDPTSSNASNKSHNHHSILLIVGVVIFLAVALLLMIYYNSVTKLIKIARGENPTVRDEEIVGDHAQTEGERNMGVEDRNELIFFKDRPKFQMVELLSASAEGLGNQGIMGNSYKAMLHGGPTVVVKKLRDLKPLSKEEFAKLLHKIYDMEHPNLLPLLAFSQDGKMLLYQYAQNGNLFFRLHGCRDRNRIPFKWRSRLSVARGVAQALDYLHQNTNTDIVPHGNLKSSNILLDKDDEPLVSDYGLTSLITPPIATQRMVVFKSPEYEHAKTVTKQSDVWSYGLLLIELLTNRVSASSAPPGFKGFDLSKWVRREVTEEWAAEILDAEIAGERKALPGILRVLEIAIRCIDRLPENRPEMREVLRELEKIEATLPAKEEENEESEDRYSTSYGSFSNSSSGIVRDDKWMK 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2463 601 SUPERFAMILY L domain-like 64 152 - -
Acco06g2463 601 MobiDBLite consensus disorder prediction 161 204 - -
Acco06g2463 601 MobiDBLite consensus disorder prediction 190 204 - -
Acco06g2463 601 MobiDBLite consensus disorder prediction 563 601 - -
Acco06g2463 601 Gene3D Transferase(Phosphotransferase) domain 1 365 587 - -
Acco06g2463 601 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 19 151 IPR046959 -
Acco06g2463 601 SUPERFAMILY Protein kinase-like (PK-like) 298 566 IPR011009 -
Acco06g2463 601 MobiDBLite consensus disorder prediction 579 594 - -
Acco06g2463 601 MobiDBLite consensus disorder prediction 563 578 - -
Acco06g2463 601 Coils Coil 551 578 - -
Acco06g2463 601 Gene3D Phosphorylase Kinase; domain 1 258 363 - -
Acco06g2463 601 ProSiteProfiles Protein kinase domain profile. 287 565 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2463 601 Gene3D Ribonuclease Inhibitor 37 153 IPR032675 -
Acco06g2463 601 Pfam Protein tyrosine and serine/threonine kinase 299 558 IPR001245 GO:0004672|GO:0006468
Acco06g2463 601 MobiDBLite consensus disorder prediction 161 181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2463 Acco-ChrAcco06 21471299 21473708 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2463 107 585 Receptor kinase-like Gene Family AT2G36570 31.286 6.27e-75 250
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco06g2463 PK_Tyr_Ser-Thr 4.6e-24 CL0016