Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2461 ATGACATTCTCCGATCAATTACTATTGAATAGCTGTACTGAAGTTTGTTTCTTATCTGGACGTGTTGGCTTCTCAGATCTTGATGGAGGAACTGAAGGCATGATTGTAGAGGTAAATCCTGTAGGTACAGAACTGGCAATGAATAATGTTGGTGGAGAGCATGAAAGACTACTTGCCCATGAACCATACATCGGGTTAGAGCTTGAATCAGCAGATGATGCACTTAAGTTTTACACTTCATATGCGAAGCAAGCTGGATTTAAAGTTCGGATTGGTCAGTTGTATCGATCAAGAACTGATGGATCAGTTTCTTCCAGAAGATTTGTGTGCTCAAAGGAGGGATATCAGCTCAGTTCAAGAACGGGTTGTCCAGCATTTATAAGAGTACAAAGGCGTGATTCAGGGAAGTGGGTTGTTGATCATTGCATTAAGGGCCACAATCATGAACTTGAACCTGAAAGTGAGGGTGAAAGTTGCCTTCCTAATATGCAGCAGAAAGATGCTACAGGTATAAAATCTGTTACTGAGTTGTCTCACAGACCAAGAAAAAAAATGCTTCAAGTCAAGGATGAGTTGGGCGTAATTAATTTTAAGCGGATGAGGAAAGCAGACGAAGGGCCGTCCAGAGCTGGGCCATATGTTGGTCAAGAATTCAGTTCATCTAATGAAGCTTACCAATCTTATCAGGCATATGCTGCATCTGTGGGTTTCAGAGTTCGTATTGGTCAATTGTTTCGGTCTAAAAATGATGGATTAATTACATCACGGCGATTTGTATGCTCAAAAGAGGGGTTCCAGCACCCTTCAAGAGTCGGCTGTGGGGCTTATTTGAGAGTTAAGAGACAGCCATCTGGGAAGTGGGTTGTGGATCGTCTTCATAAGGAGCATAATCATAATCTTGATCCTGAACAGGAGGGTAAGCCTAAAAGCCTGCCTGCTTTAAATATTTTAACAGATGAGGTTGATGCAGGATTGGTAAATGGTGACTTATTTAAAATAGATAACTACCCTGTTACTAGAGGAGGTAGACAAAATCATATAAAAAGTGATTGGTACAGTATGCTTTTTGAGTATTTTCAATCAAGACAAGCAGAAGATACAGGATTTTTCCATGCTGTGGAAATTGATAATGGCAATTGTATGAGCATATTTTGGGCTGATGGCAGATCAAGGTATTCATGCAGTCAGTTCGGTGATGTCCTTGTTTTGGATACATCATATCGGAAGAGTGTTTATTTGGTTCCGTTTGCTACTTTTATTGGCATTAACCATCACAAGCAACCTGTGCTTCTTGGGTGCGCTCTAATTGCTGATGAATCTGAAGATTCTTTCACTTGGTTGTTTCAAACATGGATGAGGGCAATGTCTGGCCGGCAGCCACTGTCAGTGATAGCTGATCAAGACATTACAATCCAGAAGGCATTAGCTAAAGTTTTTCCAGGAACTCATCATCGTTTTTCATTGTGGCAAATTAAGGCAAAAGAACAAGAGAATGTGGGTTTGTTGGGTAATAAATTTACATATGATTATGAGAGGTGCATTTACCAAAGTCTGACAGTTGAGGAATTTGACACCACATGGAATGCCCTAATCAACAAATATGGGTTGGAGAGCAATGCTTGGCTGAAGGAAATGTATGAGAAGCGTGCATCTTGGGTTCCGTTATATTTGAGGGGGACCTTTTTTGCAGGCATCCACATGAATGAAAGTGTCGATCCATTCTTTGGTACACTTTTGAATGGCCAAACACCTCTGGTGGAGTTCATTTCACGGTACGAAAGAGGTCTTGAGCGACGCCGCGAGGAAGAAAGGAAAGAGGACTTTAATACTTCCAATTTCCAACCATTCTTGCAAACGAAAGAAGCAGCAGAAGATCAATGTAGAAGGGTTTATACCCTTGCCATTTTCAAAATATTTCAAAAAGAGCTCCTGCAATCCTACAGCTATCTAGGATTTAAAATTTATGAAGAAGGGGTCCTCAGCAGATATTTGGTGCGCAAGTGTGGGAATGATCCTGAGAAGCATGTAGTTACCTTTAGTGCATCCTGTATCAGTGTAAGCTGTAGCTGTCAAATGTTTGAACATGAAGGCATTCTTTGCAGACATGTTCTAAGGGTTTTCCAAATTTTGGAATTACGAGAAGTTCCACCTCGTTACATACTACACCGCTGGACCAGAAACGCTGAGAATGGCGTTTTTCCTGATGCAGAATCATGGAGCGGTCCTCAGGAGCTAAGGAATTTGATGCTATGGAGTCTAAGAGAAACTGCATGTAAATATATAGATGCTGGGGCAACGTCTCTTGACAAGTACAAACTTGCCTATGAGATTTTGCAAGAAGGGGGCAGGAAGCTATGTTGGCATCGTTGA 2370 0.4135 MTFSDQLLLNSCTEVCFLSGRVGFSDLDGGTEGMIVEVNPVGTELAMNNVGGEHERLLAHEPYIGLELESADDALKFYTSYAKQAGFKVRIGQLYRSRTDGSVSSRRFVCSKEGYQLSSRTGCPAFIRVQRRDSGKWVVDHCIKGHNHELEPESEGESCLPNMQQKDATGIKSVTELSHRPRKKMLQVKDELGVINFKRMRKADEGPSRAGPYVGQEFSSSNEAYQSYQAYAASVGFRVRIGQLFRSKNDGLITSRRFVCSKEGFQHPSRVGCGAYLRVKRQPSGKWVVDRLHKEHNHNLDPEQEGKPKSLPALNILTDEVDAGLVNGDLFKIDNYPVTRGGRQNHIKSDWYSMLFEYFQSRQAEDTGFFHAVEIDNGNCMSIFWADGRSRYSCSQFGDVLVLDTSYRKSVYLVPFATFIGINHHKQPVLLGCALIADESEDSFTWLFQTWMRAMSGRQPLSVIADQDITIQKALAKVFPGTHHRFSLWQIKAKEQENVGLLGNKFTYDYERCIYQSLTVEEFDTTWNALINKYGLESNAWLKEMYEKRASWVPLYLRGTFFAGIHMNESVDPFFGTLLNGQTPLVEFISRYERGLERRREEERKEDFNTSNFQPFLQTKEAAEDQCRRVYTLAIFKIFQKELLQSYSYLGFKIYEEGVLSRYLVRKCGNDPEKHVVTFSASCISVSCSCQMFEHEGILCRHVLRVFQILELREVPPRYILHRWTRNAENGVFPDAESWSGPQELRNLMLWSLRETACKYIDAGATSLDKYKLAYEILQEGGRKLCWHR 789
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2461 789 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 55 167 IPR031052 GO:0006355
Acco06g2461 789 SMART 26again6 686 713 IPR006564 GO:0008270
Acco06g2461 789 Pfam FAR1 DNA-binding domain 76 151 IPR004330 -
Acco06g2461 789 Pfam FAR1 DNA-binding domain 228 301 IPR004330 -
Acco06g2461 789 Pfam MULE transposase domain 400 493 IPR018289 -
Acco06g2461 789 ProSiteProfiles Zinc finger SWIM-type profile. 663 711 IPR007527 GO:0008270
Acco06g2461 789 Pfam SWIM zinc finger 687 708 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2461 Acco-ChrAcco06 21467256 21469913 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Acco06g2461 MULE 1.7e-23 CL0219