Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2449 ATGGATTCCACACATATGGCGCTCTTCAGAGCTTTGAATCGCCAATTCTGCAGAGCTCCTTGGAGTCAATGCATTCCCGCGGTTCTTCTCCGTCACAGGCTTAAACGCCTTTCTCATAACTATGCTATGCGCAACTCCAGCTCTTTTGCTTCTTCTTCCCTCACGCTCAGGAGCTTGTGTGCGGTGGTCACCCGATTGCCCCGGCGTTTCCGGTGTGTTTCGAGCTCTGCTGCTCCGTTTGCTTCTTCTGGCGCTGGAAATGGCGGGCTTGGAGGGGTGAGTGGTGGTGGAAGAGGAGGAGAAGGAGATGGCTCCGGCGGTGATTCTGGTGATGTCAATCTCAAATTGGTTGGTGATGGTGGTAAAGAGCTTTCGGCACTTTCGCCTGATGTTATTATTCTCGATGTTGCGGGAATGGTGTGTGGTGGTTGTGCTGCAAATGTGAAAAGAATTCTAGAAAGTCGACCTCAAGTGTCATATGCTACTGTAAATCTCACAACAGAGACAGCAATAGTTTGGCCTGTATCTGAAGCAAAAACTGTACCAAATTGGCAAAAGCAATTAGGAGAAGCACTTGCAGAACATTTGAGTAGCTGTGGTTTCAAGTCTAGCCTTCGGGATTCAGCAAGGGACAGTTTCCTCCAAGTTTTTGAAAGGAAGATGGAGGAAAAGCACAGACAGTTGAAAGAAAGCGGGCGAGAGTTAGCTGTTTCCTGGGCTCTATGTGCTGTCTGCCTTGTTGGCCATCTTTCTCATTTCCTTGGAGCGAAGGCACCTTGGCTCCATGTATTTCATTCCACCGGATTTCACCTGTCACTGTCTTTGTTTACATTGGTTGGTCCAGGGCGTAAACTTATTCTTGATGGCATAAGAAGCCTTCTTAAAAATGCACCAAACATGAACACATTAGTTGGTCTTGGAGCTTTGTCATCATTTTCCGTCAGCCTATTTGCTGCCTTGCTGCCCAACTTGGGCTGGAAGGCTTTCTTTGAGGAACCAATTATGCTCATTGCATTTGTCTTGTTAGGGAGGAATCTAGAACAGAGAGCTAAAATTAAAGCAACCAGTGATATGACTGGACTTCTTAGTATATTGCCATCAAAAGCTCGCCTTTTGGTTAGCAATGACACTAAGGAGTTTGACTCAAGTGTTGAAGTTCCTTCTGACAGTCTTTCTGTTGGAGACCGAATCCTTGTGCTTCCTGGAGATCGTATCCCCGCAGATGGAATTGTCAGAACTGGTAGAAGCACTGTAGATGAGTCAAGTTTTACTGGAGAGCCTTTGCCAGCAACAAAACTACCTGGGAATCAGGTTGCTGCTGGGAGTATAAATCTAAATGGCACTCTTACAATTGAAGTGCAGAGACCAGGCAATGAGACTGCCATGGGAGACATCATTCGTCTGGTTGAAGAAGCACAGACTAGGGAAGCTCCAGTTCAACGTTTGGCTGACAAGGTGGCTGGACACTTCACTTATGGAGTAATGGCTGCTTCTGCAGCCACATTTACATTCTGGAGTCTGTTTGGAACACGCATTCTACCTGCTGCGCTTTATCAAGGAAGTGCAGTTTCTCTGGCATTGCAACTTGCTTGCAGTGTTCTGGTTGTTGCTTGTCCATGTGCACTTGGGTTGGCCACTCCTACAGCTGTGCTGGTTGGAACTTCTTTAGGAGCTACAAGAGGATTACTTTTACGGGGTGGAAACATTCTGGAGAAGTTTTCAATGGTAGATGCTATTGTGTTTGACAAAACTGGGACCTTGACGATTGGAAGACCTGTTGTGACCAGGATTGTCAATACAAGTGGACAAAACAAAAACTTAAGGCAAACTGCAGACAATGATTGGTCAGACATCGAAGTTCTTAGATTAGCTGCTGGAGTAGAATCAAATACAGTACATCCAGTCGGTAAAGCAATTGTACAAGCTGCTCAGGCAGTTAATTGTCACAATGCAAAGGTAGCAGATGGAACATTTTTGGAAGAACCTGGATCTGGTGCAGTAGCAATTATCAATAACAATAAAGTTTCAGTTGGGACTTTGGAATGGCTCACCAGGCAGGGAGTTAACAAAAATATTCATCAAGAAGTTGAGGACTATAGAAATCAGTCTGTTGTCTATGTGGGAGTAAATGATACTGTAGCTGGCCTTGTATATTTTGAAGACCAGATAAGGGAAGATGCAAGACATGTTGTTGAAGCTTTGTCTAAACAAGGAATTGGTGTTTATATGCTCTCAGGAGACAAAAGGAGTACGGCTGAGTATGTTGCATCTGTTGTTGGAATCACTAGAGAGAAGGTACTATCTGGAGTGAAGCCAGATGGCAAAAAGAAGTTTATAAGTGAACTCCAGAAAGATCAGAAAGTTGTTGCTATGGTTGGTGATGGAATCAATGATGCAGCTGCCTTGGCTTCATCACATATTGGAATTGCATTAGGCGGGGGTGCTGGAGCTGCTAGTGAGGTGTCTTCCATTGTACTGATGGGCAACAGGCTCTCGCAGCTGCTTGATGCATTGGATCTTAGCAGGCTTACCATGAAGACTGTAAAACAAAATCTTGGGTGGGCTTTCCTATACAACATTGTTGGAATCCCAATTGCAGCTGGATTGTTACTTCCAGTAAGTGGGACCATGTTAACTCCATCAATTGCAGGGGCTCTCATGGGCTTGAGTTCCATTGGGGTAGTGACAAACTCATTGCTTCTAAGATACAGATTTTCCACAAAGCAAAAACCAATCCAGGAAGTATCCCCAATGGTCGGAACCCATTCAGATAGTGATGTTGCTAAAAAAGAGAAATTGAAATATGGACATTGA 2814 0.4481 MDSTHMALFRALNRQFCRAPWSQCIPAVLLRHRLKRLSHNYAMRNSSSFASSSLTLRSLCAVVTRLPRRFRCVSSSAAPFASSGAGNGGLGGVSGGGRGGEGDGSGGDSGDVNLKLVGDGGKELSALSPDVIILDVAGMVCGGCAANVKRILESRPQVSYATVNLTTETAIVWPVSEAKTVPNWQKQLGEALAEHLSSCGFKSSLRDSARDSFLQVFERKMEEKHRQLKESGRELAVSWALCAVCLVGHLSHFLGAKAPWLHVFHSTGFHLSLSLFTLVGPGRKLILDGIRSLLKNAPNMNTLVGLGALSSFSVSLFAALLPNLGWKAFFEEPIMLIAFVLLGRNLEQRAKIKATSDMTGLLSILPSKARLLVSNDTKEFDSSVEVPSDSLSVGDRILVLPGDRIPADGIVRTGRSTVDESSFTGEPLPATKLPGNQVAAGSINLNGTLTIEVQRPGNETAMGDIIRLVEEAQTREAPVQRLADKVAGHFTYGVMAASAATFTFWSLFGTRILPAALYQGSAVSLALQLACSVLVVACPCALGLATPTAVLVGTSLGATRGLLLRGGNILEKFSMVDAIVFDKTGTLTIGRPVVTRIVNTSGQNKNLRQTADNDWSDIEVLRLAAGVESNTVHPVGKAIVQAAQAVNCHNAKVADGTFLEEPGSGAVAIINNNKVSVGTLEWLTRQGVNKNIHQEVEDYRNQSVVYVGVNDTVAGLVYFEDQIREDARHVVEALSKQGIGVYMLSGDKRSTAEYVASVVGITREKVLSGVKPDGKKKFISELQKDQKVVAMVGDGINDAAALASSHIGIALGGGAGAASEVSSIVLMGNRLSQLLDALDLSRLTMKTVKQNLGWAFLYNIVGIPIAAGLLLPVSGTMLTPSIAGALMGLSSIGVVTNSLLLRYRFSTKQKPIQEVSPMVGTHSDSDVAKKEKLKYGH 937
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2449 937 Gene3D - 571 842 IPR023214 -
Acco06g2449 937 SUPERFAMILY Calcium ATPase, transduction domain A 382 469 IPR008250 -
Acco06g2449 937 MobiDBLite consensus disorder prediction 91 111 - -
Acco06g2449 937 SUPERFAMILY Calcium ATPase, transmembrane domain M 332 861 IPR023298 -
Acco06g2449 937 CDD P-type_ATPase_HM 235 900 - -
Acco06g2449 937 SUPERFAMILY HAD-like 579 899 IPR036412 -
Acco06g2449 937 Gene3D - 591 723 IPR023299 GO:0000166
Acco06g2449 937 SFLD Haloacid Dehalogenase 563 842 - -
Acco06g2449 937 FunFam Copper-transporting ATPase PAA1 chloroplastic 708 859 - -
Acco06g2449 937 NCBIfam heavy metal translocating P-type ATPase 300 901 IPR027256 GO:0006812|GO:0016020|GO:0019829
Acco06g2449 937 ProSitePatterns E1-E2 ATPases phosphorylation site. 582 588 IPR018303 -
Acco06g2449 937 NCBIfam HAD-IC family P-type ATPase 629 871 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g2449 937 NCBIfam HAD-IC family P-type ATPase 382 601 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Acco06g2449 937 PRINTS P-type cation-transporting ATPase superfamily signature 580 594 - -
Acco06g2449 937 PRINTS P-type cation-transporting ATPase superfamily signature 715 726 - -
Acco06g2449 937 PRINTS P-type cation-transporting ATPase superfamily signature 815 827 - -
Acco06g2449 937 PRINTS P-type cation-transporting ATPase superfamily signature 737 747 - -
Acco06g2449 937 PRINTS P-type cation-transporting ATPase superfamily signature 419 433 - -
Acco06g2449 937 PRINTS P-type cation-transporting ATPase superfamily signature 792 811 - -
Acco06g2449 937 Pfam E1-E2 ATPase 365 558 - -
Acco06g2449 937 Gene3D - 350 473 - -
Acco06g2449 937 CDD HMA 134 204 IPR006121 GO:0046872
Acco06g2449 937 SFLD p-type atpase 563 842 IPR044492 -
Acco06g2449 937 ProSitePatterns Heavy-metal-associated domain. 136 165 IPR017969 GO:0046872
Acco06g2449 937 FunFam Copper-transporting ATPase PAA1 chloroplastic 591 723 - -
Acco06g2449 937 Coils Coil 214 234 - -
Acco06g2449 937 ProSiteProfiles Heavy-metal-associated domain profile. 130 204 IPR006121 GO:0046872
Acco06g2449 937 PANTHER ATP7, ISOFORM B 128 903 - -
Acco06g2449 937 SUPERFAMILY HMA, heavy metal-associated domain 132 181 IPR036163 GO:0046872
Acco06g2449 937 Pfam Heavy-metal-associated domain 134 202 IPR006121 GO:0046872
Acco06g2449 937 FunFam Copper-transporting ATPase PAA1, chloroplastic 130 205 - -
Acco06g2449 937 MobiDBLite consensus disorder prediction 916 937 - -
Acco06g2449 937 FunFam Copper-transporting ATPase 1, putative 351 473 - -
Acco06g2449 937 NCBIfam copper-translocating P-type ATPase 282 902 - -
Acco06g2449 937 Gene3D - 131 208 - -
Acco06g2449 937 Pfam haloacid dehalogenase-like hydrolase 576 804 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2449 Acco-ChrAcco06 21283883 21298248 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2449 282 902 Primary Pumps ATPases AT1G63440 37.736 1.40e-117 381