Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2447 ATGGCGGAGCGTGATTCTTACGGGCTAGGTCCTCGATTAGATATACAGCAATTACAATTTGAAGCCCAGCATCGATGGTTGCGGCCTGCTGAAATTTGTGAAATTCTTCGTAATTATCAGATGTTTCAAATCACATCAGAACCTCCAAACATGCCACCGAGTGGTTCACTTTTTCTTTTTGATAGGAAGGTATTGAGGTATTTTAGAAAGGATGGACATAATTGGAGAAAGAAAAAGGATGGAAAGATTGTGAAGGAGGCTCATGAAAAGTTGAAGGTGGGAAGTGTTGATGTATTACATTGCTACTATGCTCATGGAGAAGAAAATGAAAATTTCCAGAGGCGAAGCTATTGGTTGCTTGAACCGGATATGATGCACATTGTTTTCGTCCACTATTTGGAAGTTAAGGGTCATAAGACAAGTGTTGGAGCAAAACAAGATATTGATGAAGTTTCATCAGATTCCCAAAGAGGCAGCTCTGCATCATCTGGGTTTTCGAGAAATTATAATACTGTGCCTTCAAGAAGTACAGATTCCTTGAGTCCAACTAGCACTTTGACATCCTTATGTGAAGATGCTGACTCTGGTGATCGTGCACAGTCACTGATTTCTGGAGCAGACTATATTTCGCATGTTCAGCGAGATAAACCTAGAGGCAGTGGTGCTAGTACTTCTTTCATTGATAGCCAAAAAACAAATGGAATGGCCTTACAGGACAATGGCTTTGGACAATGTACACATGGATTATCTACTGATCCATCCCTTGACTCATTTACTTCCATCCCATCTAATTCAATAGGAAACACGCTTGAACCAGAAAATACTATCCCAGGTGACCTTTTAGCCATTAAAAATGCCCTCACTGGGCCAGCCAGGAGTTCTCAATCCCTCCAATCAAATTGGCAGATACCGTTTGGAAGTAATCCAGCACAGATGTCCAAAGAGCTTACAGCCCAATCGCTTCGTTTGGAATTTGGATCTGATTTTAGCTATGGTTTGCTGGAACATGAAACAAACAATGATGTTGCTTCTGGCTCTGCAACTTTTAACTGTCAGCGAGGAGAGGAGCCTGTGCAGGAAAACTTTCCAGAGCAGAATACAGACACTCAATCTCAAAATTTTCTGAAATACAGTTTTGGAAAGGAAGTTCCCCCAGAAGAAAGCATTAGTTATGCCTTGACTGTGAAGCGGTCCTTATTAGATGGGGAAGAAAGCCTAAAGAAAGTTGACAGCTTCTCTCGATGGATTACTAAAGAACTTGATGAGGTGGATGATCTTCATATGCAGTCATCACCTGGCATCTCTTGGAGCGCTGATGAATGTGGGCATGTGATAGATGACTCCTCATTGAGCCCCTCTCTCTCTCAGGACCAGCTGTTTAGCATAAATGATTTTTCACCTAACTGGGCATATGCTGAATCAGAAACAGAGGTTTTGATCATTGGAACATTTTTGAGGAGTCAAACAGAGGTAGCGAATTATAACTGGTCGTGCATGTTTGGGGAAGTTGAGGTTCCTGCCGAGGTTCTAGCGAGTGGAATTCTGTGCTGTCAGGCTCCACCTCTCAAGGTTGGACGGGTTCCCTTCTATGTAACATGCTCCAATAGGTTGGCTTGCAGTGAAGTGCGGGAATTTGATTACGCAGAGGGCTTCGCTGAAAATGTTGATGTTTCAGATTTCTATATCAGTTCAACTGAGATACAGCTTCATCTGAGACTAGAGAAGCTACTTTCTTCAAAATCTGCGCTCTCTTCAAATTACAGCTTTGACAATGATATGGTGAGAAGAAACTTAATGTTTAAGCTCATTACGCTAAAGGAGGAGGAAGCATTCTCAGACAGGGAAGAGCTGATGTCGGAGAAGGATGCTTCCCAGCAAAAGGTGAAGGAGTTGATATTTTACAGGCAAGTTAAAGAGAAGCTGTACTCTGGGCTGCTTCGCAAAGTAATTGAAGATGGTAAAGGGCCAAATGTTTTGGATGAAGAGGGGCAAGGTGTGCTTCATTTTGCAGCCGCTCTTGGTTATGATTGGGCAATAATGCCAATCGTTATTGCTGGAGTAAATATCAATTATCGGGACGTGAATGGATGGACAGCTCTGCACTGGGCTGCATCCTATGGCAGGGAACGAACTGTTGCTGTACTTGTCTCCATGGGTGCAGCTGCTGGAGCATTGACAGATCCATCCCCAACGTTTCCCTCTGGTAGAACAGCAGCGGATCTTGCTTCTAGCAATGGGCACAAAGGAATCTCTGGTTTCCTTGCAGAGTCATCATTAACCAGCCACCTTTCAACCCTCACAATGACTGATCAGAAAGGAGATGTTGTGCAAAGAGCTTCAGAAGTAGAAGAAGTACAGACAGTTTCAAAACGAACTGCAACACCAGGGTTTAGCGGTGATATGCCAGATGCCCTCTGCCTTAAGGATTCCCTTACTGCTGTCCGTAATGCTACTCAGGCAGCTGATCGTATATACCAAGTATTCAGAATGCAGTCATTTCAGAGGAAGCAGTTGACCCAGCTTGAAGATGATGAGTTTGGATTGTCAGATCAGCAAGCTCTTTCCCTTGTAGCTTCTAAGGCGTGTAAGGTTGGATATGGGGAAGATTTAGCCTATACTGCTGCTGTACAAATACAGAAAAAGTTTCGTGGTTGGAAGAAAAGAAAAGAATTTCTAATAATTCGTCAAAGAATTGTTAAAATTCAGGCCCACGTAAGAGGTCACCAGGTAAGGAAGCAGCATAAATCAGTCCTTTGGTCTGTCGGAATTTTGGAGAAGGTAATATTGCGATGGAGACGCAAGGGCAGTGGTTTACGCGGCTTCCGACCAGATGCTAGTAAACTCCCCAAGCAAGAAAATGATACTGTGAAAGATGCTGTGAAAGAGGATGATTACGATGTTCTCAAGGAAGGAAGAAAACAAAGTGAGGAAAGGTTCCAAAAGGCGCTTTCGAGGGTGAAGTCTATGGTTCAGTATCCAGAGGCACGGGCTCAGTACCGGCGTCTGCTGAATGTTGTTGAGGACTTTCGGCAAACAAAGGCATGTGATAAGGATGTGATCAATTCAGAAGAGACGGTCGATGGAGTAGAGGACCTTATTGACATTAACATGCTCTTAGATGATGACAATTTCATACCCATAGCATTTGATTGA 3153 0.4332 MAERDSYGLGPRLDIQQLQFEAQHRWLRPAEICEILRNYQMFQITSEPPNMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKIVKEAHEKLKVGSVDVLHCYYAHGEENENFQRRSYWLLEPDMMHIVFVHYLEVKGHKTSVGAKQDIDEVSSDSQRGSSASSGFSRNYNTVPSRSTDSLSPTSTLTSLCEDADSGDRAQSLISGADYISHVQRDKPRGSGASTSFIDSQKTNGMALQDNGFGQCTHGLSTDPSLDSFTSIPSNSIGNTLEPENTIPGDLLAIKNALTGPARSSQSLQSNWQIPFGSNPAQMSKELTAQSLRLEFGSDFSYGLLEHETNNDVASGSATFNCQRGEEPVQENFPEQNTDTQSQNFLKYSFGKEVPPEESISYALTVKRSLLDGEESLKKVDSFSRWITKELDEVDDLHMQSSPGISWSADECGHVIDDSSLSPSLSQDQLFSINDFSPNWAYAESETEVLIIGTFLRSQTEVANYNWSCMFGEVEVPAEVLASGILCCQAPPLKVGRVPFYVTCSNRLACSEVREFDYAEGFAENVDVSDFYISSTEIQLHLRLEKLLSSKSALSSNYSFDNDMVRRNLMFKLITLKEEEAFSDREELMSEKDASQQKVKELIFYRQVKEKLYSGLLRKVIEDGKGPNVLDEEGQGVLHFAAALGYDWAIMPIVIAGVNINYRDVNGWTALHWAASYGRERTVAVLVSMGAAAGALTDPSPTFPSGRTAADLASSNGHKGISGFLAESSLTSHLSTLTMTDQKGDVVQRASEVEEVQTVSKRTATPGFSGDMPDALCLKDSLTAVRNATQAADRIYQVFRMQSFQRKQLTQLEDDEFGLSDQQALSLVASKACKVGYGEDLAYTAAVQIQKKFRGWKKRKEFLIIRQRIVKIQAHVRGHQVRKQHKSVLWSVGILEKVILRWRRKGSGLRGFRPDASKLPKQENDTVKDAVKEDDYDVLKEGRKQSEERFQKALSRVKSMVQYPEARAQYRRLLNVVEDFRQTKACDKDVINSEETVDGVEDLIDINMLLDDDNFIPIAFD 1050
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2447 1050 Pfam Ankyrin repeats (3 copies) 667 756 IPR002110 GO:0005515
Acco06g2447 1050 MobiDBLite consensus disorder prediction 147 191 - -
Acco06g2447 1050 FunFam Calmodulin-binding transcription activator 2 455 551 - -
Acco06g2447 1050 Pfam IQ calmodulin-binding motif 896 915 IPR000048 GO:0005515
Acco06g2447 1050 Pfam IQ calmodulin-binding motif 874 891 IPR000048 GO:0005515
Acco06g2447 1050 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Acco06g2447 1050 SMART ANK_2a 695 724 IPR002110 GO:0005515
Acco06g2447 1050 SMART ANK_2a 734 763 IPR002110 GO:0005515
Acco06g2447 1050 Gene3D Immunoglobulins 455 550 IPR013783 -
Acco06g2447 1050 ProSiteProfiles Ankyrin repeat region circular profile. 695 720 - -
Acco06g2447 1050 ProSiteProfiles IQ motif profile. 871 900 IPR000048 GO:0005515
Acco06g2447 1050 Pfam IPT/TIG domain 462 540 IPR002909 -
Acco06g2447 1050 SUPERFAMILY Ankyrin repeat 646 756 IPR036770 -
Acco06g2447 1050 ProSiteProfiles Ankyrin repeat profile. 695 727 IPR002110 GO:0005515
Acco06g2447 1050 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 870 920 IPR027417 -
Acco06g2447 1050 FunFam Calmodulin-binding transcription activator 2 871 918 - -
Acco06g2447 1050 Gene3D - 620 766 IPR036770 -
Acco06g2447 1050 SMART CG_1_2 18 136 IPR005559 GO:0003677
Acco06g2447 1050 SMART iq_5 893 915 IPR000048 GO:0005515
Acco06g2447 1050 SMART iq_5 870 892 IPR000048 GO:0005515
Acco06g2447 1050 MobiDBLite consensus disorder prediction 147 192 - -
Acco06g2447 1050 Gene3D - 871 917 - -
Acco06g2447 1050 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Acco06g2447 1050 ProSiteProfiles IQ motif profile. 894 918 IPR000048 GO:0005515
Acco06g2447 1050 SUPERFAMILY E set domains 462 547 IPR014756 -
Acco06g2447 1050 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 14 1012 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2447 Acco-ChrAcco06 21221661 21232881 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2447 1 1031 CAMTA Transcription Factor Family AT5G64220 52.158 0.0 1030
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Acco06g2447 CG-1 4e-50 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2447 06 21221661 21232881 Acco06g2447 06 21221661 21232881 CCT