Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2441 ATGACTCCCTCCCCAGCAACTCTATGCTCAGCACTCTCTCTTGCCGAAACCCCGGAGATGTTTAATTTGGACTTGAGCATAGAGTTGCTGGGGAGGGAGCTCAGAGTAGAGACTCAATCAATCCGTCATTTCTTCTGGTTTTTCTGTGTCGATCGCCGCCGCCGAAGGGCGATAATGGCGACAGTCACTACCACTGCTCCACCGTCAGCTCCGCCTCCACAAGCCCTAAAATTAGAATCCCTTCCTCGCATAGTCACCACCACGCTCTCTCAATCTGAGCTCCAAGCGCTCTCTCTCTGCTCAGTCTCCGCCTTCGACCTCACCTCCACCACCAACCTCGTTTTCCCCCATGTCGACCGTTCACTCTTCAATGAGAGCGCTGGTTCTCGCCGTCAGACCTACTCCCGACCACGCAAACCCCTTTCCCCTTCTGAATCCCCCACTGGTCACCGTCGCCGCGTCGCCGGTCTTCTTCCAACTCCAAAGCTCCCTCCTGTCCCCGATGACGACCCGGAAAACTTAGAGAACCGCAAGATTATAGATTCTTTGAAGCAATTGATCAGGGAAGACCCTAAATTCGATCAAGTTGAGCTAGCCCCACCTTCTGTTAGCCACGAAATTGTGCCAAATTTTGAACTAAGGGTTGGGATGGGTGAGAGCGAGGATATGGGGCTGGTGAGGAAGAGGAAGAGGGGGAGGAAACCCAAAGTGAAGGCGCATTTGAAGGAGTGCTATAGAGAGATGGATTTTGTGAATAAGGGTGGTGTTGCGATTGATCTTTCTGCTTTAGCGAATACGGAGGATCCATTTTCTGATGAGTTGAGGAGAAGGACTGAGGGGCTGCAGAGTGAAGAAGAGTTATTGGGGTTTTTGAGGGATTTGGGGGGACAATGGGGAAGTCGGAGGAAGAAGAGGAAGATTGTGGATGCCGGAGATTTTGGCGATGTACTTCCGGTTGGTTGGAAGCTTCTACTGGGTTTGAAGAGAAAAGATGGTCGCGCTTGGATTTATTGCCGCAGATACATCAGTCCTAGTGGAGAACAATTTGTATCTTGCAAAGAAGTTTCTTCATATCTTCAGTCCCTTGTTAGTCACAATGATGCCCAGTTGCCAATCACTTGTGGGGTTGAAAATATGCTGATGGACAATAAGGTGACTACTCAAAGTTTTGCAGGTGTTACCCCTGAGGAGCAGGATAGACGGATGATCAATGCAAATGACTCAGCTCCACTCAGTTCTTCTGAATGTAATGATCGGTCAAAGGATGTGGCCTTACTGGGAATTGAGAATCTTGCAGATATTCAAATACATGACCTATTTGAATGTCGCAAATGTAGCATGACATTTGATCAGAAGGATTCATACTTGCAGCACCTTTTGTCCTTCCACCAAAGGACAACAAGGCGCTATCGACTTGGTTCTTCTGTTGGAGATGGAGTCATAATCAAAGATGGAAAATTTGAGTGCCAGTTCTGTCATAAGGTGTTTCTTGAAAGGCGTCGCTACAATGGACATGTGGGGATCCATGTTAGGAACTATGTGAGGAAAGTTGAAGAATCACCAAGTCAGGTAAATGTTCAAAGGAGAGATAAGTCTCTGATCAGGGAGGATTTGCCTTCAAGGATCTCTAAGATGGATGCACTAATTGAAATTGCTCAGAACTCTATTATGGAGAATTCTGCTATTGAACCCCTTGGTAATCATACTACATCTCCTGATAGACTGAATGTAATTTCTACTACAGAAATTGCTGTTGGTAACTTAGATCATGACAACATTATTGAGTCTCCTCTCAGTGATCAGAAAATGGAAGATAGCGTCAACTACAAAAATTTTGATCACAATTTGAATCACCAAGGTAGTCAACTTGCAGCCATGGATGAAGAAGTAGAGAAAACTGATGGCGGCAACGAAATTATAGATTCTAAGATAGAGACCTGTGAGGATCCCATTGGTTTGTCAACTCTAAACGACCAAAATGCTGATGCATTTGAGAATTCAAAAATAAAAGATGATGTGGTAATGTCTTTTGATGGTTTGGATCAGTCCAGTGTTGATTTGGAAAGAGTTTCACGAAGCCCTTTACTTTCTTTATCTGGCAATGGTATGACCCCTGAAGTTGAAAGTAATCGAAGTTCTGGTGGCAATGTTACTGTAGAGCAACTTAACCATGAGGGAGATAGTAGAATTAGGAATGAGTTCAAAGTTGAATTAGATGGCACAAAAGATGTATCTATTATGCCTAAAATCCAAGAGACAAGATTGCCAACCTCTGAAGAGAATACAGTGTCATCTGAGGTGCCAACCCCATCTATGTCCATGGTACAATCTCTGGATTACTTTTCCCATCTCACTGGACTCTTAGATAAGGGTGAAAAGGAAAACCCATGTGGCAGTGTTGACCACAAACATCATGACGTGAGTGGGTCCCAGGATTTGAGGATTGATGAAACAGAAACTACAAAGTGTGATTTTTCAATCGGTCAGCCTTCTCTTTCTCTGCCTCCGGTGCCAATAGTTTTGGCAAACAAAACAGAGATGGAAGAAGAAGAAGGGGCTTGTGCTTCCTCAGTTCAGGTTCAATCTCAAGAAGCAGGAAGACATCAGATCCCAACATCGTGTGTATGGTGTGGTGTAGAGTTTGATTATGATGCTGTTGATTCTGAAATACAACCAGATTCTGTTGGATTCATGTGCCCGGCTTGTAAGGCCAAAATATCTGGTCAAATAGATGTGCTGGACAGTGGATCACCCTTGAATTCTGACCATATTTGA 2775 0.4476 MTPSPATLCSALSLAETPEMFNLDLSIELLGRELRVETQSIRHFFWFFCVDRRRRRAIMATVTTTAPPSAPPPQALKLESLPRIVTTTLSQSELQALSLCSVSAFDLTSTTNLVFPHVDRSLFNESAGSRRQTYSRPRKPLSPSESPTGHRRRVAGLLPTPKLPPVPDDDPENLENRKIIDSLKQLIREDPKFDQVELAPPSVSHEIVPNFELRVGMGESEDMGLVRKRKRGRKPKVKAHLKECYREMDFVNKGGVAIDLSALANTEDPFSDELRRRTEGLQSEEELLGFLRDLGGQWGSRRKKRKIVDAGDFGDVLPVGWKLLLGLKRKDGRAWIYCRRYISPSGEQFVSCKEVSSYLQSLVSHNDAQLPITCGVENMLMDNKVTTQSFAGVTPEEQDRRMINANDSAPLSSSECNDRSKDVALLGIENLADIQIHDLFECRKCSMTFDQKDSYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFLERRRYNGHVGIHVRNYVRKVEESPSQVNVQRRDKSLIREDLPSRISKMDALIEIAQNSIMENSAIEPLGNHTTSPDRLNVISTTEIAVGNLDHDNIIESPLSDQKMEDSVNYKNFDHNLNHQGSQLAAMDEEVEKTDGGNEIIDSKIETCEDPIGLSTLNDQNADAFENSKIKDDVVMSFDGLDQSSVDLERVSRSPLLSLSGNGMTPEVESNRSSGGNVTVEQLNHEGDSRIRNEFKVELDGTKDVSIMPKIQETRLPTSEENTVSSEVPTPSMSMVQSLDYFSHLTGLLDKGEKENPCGSVDHKHHDVSGSQDLRIDETETTKCDFSIGQPSLSLPPVPIVLANKTEMEEEEGACASSVQVQSQEAGRHQIPTSCVWCGVEFDYDAVDSEIQPDSVGFMCPACKAKISGQIDVLDSGSPLNSDHI 924
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2441 924 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 307 379 IPR001739 GO:0003677
Acco06g2441 924 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 8 59 706 IPR037472 -
Acco06g2441 924 ProSiteProfiles Zinc finger C2H2 type domain profile. 440 468 IPR013087 -
Acco06g2441 924 MobiDBLite consensus disorder prediction 126 142 - -
Acco06g2441 924 MobiDBLite consensus disorder prediction 126 174 - -
Acco06g2441 924 ProSitePatterns Zinc finger C2H2 type domain signature. 442 463 IPR013087 -
Acco06g2441 924 ProSitePatterns Zinc finger C2H2 type domain signature. 489 509 IPR013087 -
Acco06g2441 924 Gene3D Classic Zinc Finger 396 515 - -
Acco06g2441 924 SUPERFAMILY DNA-binding domain 315 366 IPR016177 GO:0003677
Acco06g2441 924 ProSiteProfiles Zinc finger C2H2 type domain profile. 487 514 IPR013087 -
Acco06g2441 924 SMART c2h2final6 487 509 IPR013087 -
Acco06g2441 924 SMART c2h2final6 440 463 IPR013087 -
Acco06g2441 924 MobiDBLite consensus disorder prediction 696 717 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2441 Acco-ChrAcco06 21151753 21157744 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Acco06g2441 None None None