Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2409 ATGGAAAATGACGACGTCGACATGCAAAGCGCCGAGAACAATGAAGCAGAATTGGATGACATGAAGAAACGTTTGAAGGAGATGGAAGATGAAGCTGCTGCTTTGCGAGAAATGCAGGCCAAGGTGGAGAAGGAGATGGGCTCCGTGCAAGATCCTGCTAATGCTGCTGCAAGTCAGGCCAATAAAGAGGAAGTAGATTCTCGGTCAGTCTTTGTAGGCAATGTAGACTATTCATGCACTCCTGAAGAAGTGCAGCAGCATTTCCAATCATGTGGAACAGTAAACAGAGTCACCATTCGTACTGACAAATTTGGCCAACCCAAGGGTTATGCTTATGTGGAGTTCCTTGAGGTAGAGGCTGTTCAGGAGGCACTTCTGCTGAATGAATCTGAACTGCATGGGCGTCAGTTGAAGGTAACAGCCAAGAGGACCAACATACCTGGGATGAAGCAGTATCGTGCCCGCCGGTCCAATCCTTACATGGGGTTTCGAGGCCGAACCCCATATCCACCTCCTTTTGCCTATTCACCATATGGATATGGGAAGGTTCCAAGGTTCAGAACGCCACTGCGTTATAGCCCATACTATTGA 591 0.4822 MENDDVDMQSAENNEAELDDMKKRLKEMEDEAAALREMQAKVEKEMGSVQDPANAAASQANKEEVDSRSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTIRTDKFGQPKGYAYVEFLEVEAVQEALLLNESELHGRQLKVTAKRTNIPGMKQYRARRSNPYMGFRGRTPYPPPFAYSPYGYGKVPRFRTPLRYSPYY 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2409 196 Gene3D - 1 151 IPR012677 -
Acco06g2409 196 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 68 144 IPR000504 GO:0003723
Acco06g2409 196 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 70 138 IPR000504 GO:0003723
Acco06g2409 196 MobiDBLite consensus disorder prediction 43 64 - -
Acco06g2409 196 SUPERFAMILY RNA-binding domain, RBD 58 166 IPR035979 GO:0003676
Acco06g2409 196 CDD RRM_II_PABPs 69 140 - -
Acco06g2409 196 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 9 164 - -
Acco06g2409 196 SMART rrm1_1 69 140 IPR000504 GO:0003723
Acco06g2409 196 MobiDBLite consensus disorder prediction 1 25 - -
Acco06g2409 196 Coils Coil 8 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2409 Acco-ChrAcco06 20325345 20329434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2409 69 139 Eukaryotic Initiation Factors Gene Family AT2G36660 31.944 7.50e-08 49.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2409 06 20325345 20329434 Acco06g2409 06 20325345 20329434 CCT