Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2408 ATGGCTTCCCTTCTTCATCCATCTGTAGCACCAGATAATAGCTCTAAAGTTGTAGAATTACAAACCGGTCATGACTTTATTACCCCATTTGAAAACACGGGGATCAAGCCAACAGATAGAAGCAAAGGTACTCAGAAAGAGGATGATGGGGTTTTCATGACATGGGAAGACTTGTGGGTCACTGTTGGTAGTGGAAAGAATAAAAAACCATTATTGCAGGATCTCATTGGGTATGCCAAACCAGGACAGCTTTTGGCCATAATGGGTCCTTCAGGATGCGGCAAAACCACACTCCTTGATGCTTTAGCAGGAAGATTGGGTTCAAGCATGCAGCAAACAGGGAAGATTCTTATCAACGGGCACAGACAGGCGCTAGCATATGGAACATCAGCATATGTCACCCAAGATGATGCCATGTTGTCAACTTTAACAGCTGGGGAAGCTTTATATTACTCATGTCAGCTCCAGCTTCCTGATTCCATGTCCATGGGAGAGAAGAAGGAGAGAGCGGACACTACACTCAAAGAAATGGGTCTACAAGATGCCATCAACACAAGGATTGGAGGATGGGCTTCAAAAGGCCTTAGCAGTGGACAAAAGAGAAGACTTAGCATTTGCATTGAGATTATAACACGTCCGAAACTTCTCTTCCTTGATGAACCAACCAGTGCGCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCGAGTCTTAACATAAGGGATGGCATTAAGAGAACAATTGTAGCATCTATCCATCAGCCTAGCAGTGAAGGTTTTCAACTTTTCCATAATCTTCTCTACAATCCTTCTGATAATTTCTTAAAGATCATAAACAAGGATTTTGAACTGGATCCAGAAGAAGGCTTTGGTACAAGAGAAACCACAGAAGAAGCGATTGATATCCTTGTAGAGTCCTATAAGTCAATTGAAATTCGCAAACAAATTCTGAAAGAAGTGGAAGAAATAAGCGAAACTGATTCTGATGCGATAGGGAAAAAGAGAATCCATGCTGCATTCCTCACTCAGTGCCTTGTTCTTATAAGAAGATCTTCCCTGCATATGTACCGTGACATGAGCAATTATTGGTTACGTCTCGCTGTATATGTCGCAATAGCTATAAGTCTGGGTACTATATTCTACAACGTCGGCTCAAGTATTGAATCTATTCAGGCGAGAGGATCGCTGCTCACATTTTTTGTTTCAGTCCTCTCTTTCATAACTCTTATTGGTGGATTCCCTCCATTTTTAGAGGAAATGAAGGTATTTAAAAGAGAGAGATTGAATGGACACTATGGTGTCACTGCTTTTCTGATTGGCAACACGTTATCTTCTATTCCATACATGATACTGATATCTCTAATACCTGGAGGAATAGTTTATTGCCTTTCCGGGCTGCACAAAGGACTTGAACACTTTTTGTATCTGACGTCTGTGTTGTTTGCCACTGTTATGTCTGTTGAGAGCCTCATGATGGTTGTTGGGAGCTTCTTCCCCAATTTTATATTGGGGATGATCATTGTTGGTGGAATTCAAGAAGTCATGATATTACTTGGCGGTTTCTATAGACTGCCAGATGATCTCCCCAAGCCATTTTGGAGATACCCATTATATTATATTTCATTCCACAAGTATGCCTTCCAAGGGTTGTTCAAGAATGAATTTGTAGGTTTGACATTTGCCAGTGCTCATGATGGAGACAGAAAACCCACTAGTAGTAGAGAAATTCCGACAAACGCATGGCAAGTGGAAATGGGCTACTCTAAGTGGGTTGATCTTTCTATCTTGCTCGGAATGATTGTTCTATATCGGCTTCTGTTCTTGGCCATTACTAAGACCAAGGAGAACGCAAAGCCTATGATTGCAGCTATCAGTTGTCCCCCAAGCAAAATTGCGATGACCTGA 1911 0.4155 MASLLHPSVAPDNSSKVVELQTGHDFITPFENTGIKPTDRSKGTQKEDDGVFMTWEDLWVTVGSGKNKKPLLQDLIGYAKPGQLLAIMGPSGCGKTTLLDALAGRLGSSMQQTGKILINGHRQALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMSMGEKKERADTTLKEMGLQDAINTRIGGWASKGLSSGQKRRLSICIEIITRPKLLFLDEPTSALDSAASYYVMSRIASLNIRDGIKRTIVASIHQPSSEGFQLFHNLLYNPSDNFLKIINKDFELDPEEGFGTRETTEEAIDILVESYKSIEIRKQILKEVEEISETDSDAIGKKRIHAAFLTQCLVLIRRSSLHMYRDMSNYWLRLAVYVAIAISLGTIFYNVGSSIESIQARGSLLTFFVSVLSFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLIGNTLSSIPYMILISLIPGGIVYCLSGLHKGLEHFLYLTSVLFATVMSVESLMMVVGSFFPNFILGMIIVGGIQEVMILLGGFYRLPDDLPKPFWRYPLYYISFHKYAFQGLFKNEFVGLTFASAHDGDRKPTSSREIPTNAWQVEMGYSKWVDLSILLGMIVLYRLLFLAITKTKENAKPMIAAISCPPSKIAMT 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2408 636 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Acco06g2408 636 Pfam ABC-2 type transporter 344 557 IPR013525 GO:0016020|GO:0140359
Acco06g2408 636 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 270 625 - -
Acco06g2408 636 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 52 258 IPR027417 -
Acco06g2408 636 Gene3D - 53 270 IPR027417 -
Acco06g2408 636 SMART AAA_5 81 283 IPR003593 GO:0016887
Acco06g2408 636 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 304 IPR003439 GO:0005524
Acco06g2408 636 Pfam ABC transporter 78 223 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2408 Acco-ChrAcco06 20317558 20320826 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2408 71 233 Calmodulin-binding Proteins AT2G36910 26.627 2.04e-07 52.4