Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2406 ATGGCTTCCCTTCTTCATCCATCTGTAGCACCAGATAATAGCTCTAAAGTTGTAGAACTACAAACCAGTCATGACTTTATTACCCCCTTTGAGAACACGGCGATCAAGCCAACAGATAGAAGCAAAGGTACTCAGAAAGAGGATGATGGAGTTTTCATGACATGGGAAAACTTGTGGGTCACTGTTGGTAGTGGAAAGAATAAAAAACCATTATTGCAGAATCTCACTGGGTATGCCAAACCAGGACATCTTTTGGCCATAATGGGTCCTTCAGGATGCGGCAAAACCACACTCCTTGATGCTTTAGCAGGAAGATTGGGTTCAAGCATGCAGCAAACAGGGAAGATTCTTATCAACGGGCACAGACAAGCGCTAGCATATGGAACATCAGCATATGTCACCCAAGATGATGCTATGTTGTCAACTTTAACAGCTGGGGAAGCTTTATATTACTCATGTCAGCTCCAGCTTCCTGATTCCATGTCCATGGAAGAGAAGAAGGCGAGAGCGGACACTACACTCAGAGAAATGGGTCTACAAGATGCCATCAACACAAGGATTGGAGGATGGGCTTCAAAAGGCCTTAGCAGTGGACAAAAGAGAAGACTTAGCATTTGCATTGAGATTATAACACGTCCGAAACTTCTCTTCCTTGATGAACCAACCAGTGGGCTTGATAGTGCAGCTTCTTATTATGTTATGAGCAGAATTGCCAGTCTAAACATAAGGGATGGCATTCAGAGAACAATTGTAGCATCTATCCATCAGCCTAGCAGTGAAGTTTTTCAACTTTTCCATAATCTCTGTCTTCTGTCTTCTGGCGAAACAGTATATTTTGGCCCTGCATCTGAGGCAAATGAGGTCTTTGCTACAAATGGTTTTCCTTGTCCAAGTCTCTACAATCCTTCTGATCATTTCTTAAAGATCATAAACAAGGATTTTGAACAGGATCCAGAAGAAGGCTTTGGTACGAGAGAAACCACAGAAGAAGCGATTAATATCCTTGTAGAGTCCTATAAGTCATTTGAAATTCGCAAACAAATTCTGAAAGAAGTGGAAGAAATAAGCGAAAGTGATTCTGATGCGAAAGGGAAAAAGAGAGTCCATGCTGCATTCCTCACTCAGTGCCTTGTTCTTATAAGAAGATCTTCCCTGCATATGTACCGTGACATGAGCAATTATTGGTTACGTCTCGCTGTATATGTCGCAATAGCTATAAGTCTGGGTACTATATTCTACAACGTCGGCTCAAGTATTGAATCTATTCAGGCGAGAGGATCGCTGCTCACATTTTTTGTTTCAGTCCTCTCTTTCATAACTCTTATTGGTGGATTCCCTCCATTTTTAGAGGAAATGAAGGTATTTAAAAGAGAGAGACTGAATGGACACTATGGTGTCACTGCTTTTCTGATTGGAAACACATTATCTGCTATTCCATACATGATACTGCTATCTCTGATACCTGGAGGAATAGTTTATTGCCTTTCTGGGCTGCACAAAGGACTTGAACACTTTTTGTATCTGACGTCTGTGTTGTTTGCCACTGTTTTGTCTGTTGAGAGCCTCATGATGGTTGTTGGGAGCTTATTCCCCAATTTCATAATGGGGATGATCATTGTTGGTGGAATTCAAGGAGTCATGATATTACTTGGCGGTTTCTATAGACTGCCAGATGATCTCCCCAAGCCATTTTGGAGATACCCGTTATACTATGTTTCATTCCACAAGTATGCCTTCCAAGGGTTGTTCAAGAATGAATTTGAAGGTTTAACATTTGCCACCGCTCATGATGGAGACAGAAAAACCACTAGTGGTAGAGAAATTCTGACAAACACATGGCAAGTGGAAATGGGCTACTCTAAGTGGGTTGATCTTGCTATTTTGCTCGGAATGATTGTTCTATATCGACTTCTGTTCTTGGCCATTACTAAGACCGAGGAGAATGCAAAGCCTGTGATTGCAGCTATTGGTTGTCCCCCAAGCAAAATTACGATGACCCTAAGGAATCAGCAGAATTAA 2019 0.417 MASLLHPSVAPDNSSKVVELQTSHDFITPFENTAIKPTDRSKGTQKEDDGVFMTWENLWVTVGSGKNKKPLLQNLTGYAKPGHLLAIMGPSGCGKTTLLDALAGRLGSSMQQTGKILINGHRQALAYGTSAYVTQDDAMLSTLTAGEALYYSCQLQLPDSMSMEEKKARADTTLREMGLQDAINTRIGGWASKGLSSGQKRRLSICIEIITRPKLLFLDEPTSGLDSAASYYVMSRIASLNIRDGIQRTIVASIHQPSSEVFQLFHNLCLLSSGETVYFGPASEANEVFATNGFPCPSLYNPSDHFLKIINKDFEQDPEEGFGTRETTEEAINILVESYKSFEIRKQILKEVEEISESDSDAKGKKRVHAAFLTQCLVLIRRSSLHMYRDMSNYWLRLAVYVAIAISLGTIFYNVGSSIESIQARGSLLTFFVSVLSFITLIGGFPPFLEEMKVFKRERLNGHYGVTAFLIGNTLSAIPYMILLSLIPGGIVYCLSGLHKGLEHFLYLTSVLFATVLSVESLMMVVGSLFPNFIMGMIIVGGIQGVMILLGGFYRLPDDLPKPFWRYPLYYVSFHKYAFQGLFKNEFEGLTFATAHDGDRKTTSGREILTNTWQVEMGYSKWVDLAILLGMIVLYRLLFLAITKTEENAKPVIAAIGCPPSKITMTLRNQQN 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2406 672 ProSitePatterns ABC transporters family signature. 195 209 IPR017871 GO:0005524|GO:0016887
Acco06g2406 672 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 44 655 - -
Acco06g2406 672 Pfam ABC-2 type transporter 255 361 IPR043926 GO:0140359
Acco06g2406 672 FunFam ABC transporter G family member 11 51 338 - -
Acco06g2406 672 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 53 287 IPR027417 -
Acco06g2406 672 Coils Coil 667 672 - -
Acco06g2406 672 SMART AAA_5 81 270 IPR003593 GO:0016887
Acco06g2406 672 Gene3D - 53 312 IPR027417 -
Acco06g2406 672 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 53 298 IPR003439 GO:0005524
Acco06g2406 672 Pfam ABC-2 type transporter 374 587 IPR013525 GO:0016020|GO:0140359
Acco06g2406 672 Pfam ABC transporter 72 223 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2406 Acco-ChrAcco06 20300503 20303757 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2406 71 233 Calmodulin-binding Proteins AT2G36910 29.143 7.37e-08 53.9