Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2402 ATGGACGACGGAGAAGACATCAAAAATCCAAGTTACTGGGAAAAGCCTATGGCGAGTTTTCTCATACGTAATCATTCGGACCAGCTCCGCTGCGTTGTATCTTCTCCAGATTCCAAGCTTCATTACCCTCTCTTTGTCGATTTCGCAGAGTTGATGGACGATGACCCTCACCTTGCCCACCTCATATTCACCGAACCCGCTAGATATTTACAAATATTCGATCAGGCTGCTGTTTGGGCTCATAAAATCATTTTGGGGGAATCGGGAGCAGAAGAGAAATGGGTTGAGAAAAAGACGATTAATGTCCGCATCAATACAAGTGGCTCTCCCCTTGAATGCCCAGAGTCTTTTCCAAGCATAGGACGTATTAGAGTGAAGCACCGGGGGATTCTTCTAACTTTGAAAGGGACAGTAATCAGGTCTGGAGCAATAAAGATGCATGAAGGAGAGAGGGAGTATATGTGCCTAAAGTGCAAGAAGAGCTTCCTAGTTTATCCAGAGGTGGAAGCACGAAACTCCATAACTCTACCTTCTATTTGCCAAGTTCAGGGGTCTAAGCCCTGTGGAGGAATAAAATTCCAGTATGTTGACAATACTATAGTATGTCATGATTATCAAGAGATTAAAATCCAAGAAAGCACACAGGTTCTTGGTGTTGGGGTTATTCCTCGTTCAATTCTTGTCATCTTGAAGGATGACCTTGTTGACATTGTTAAAGCTGGAGATGATGTAATTGTTTCCGGGGTGTTGACAGCAAAATGGTCATCAGAAGTCAAAGATGTGCGCTGTGATCTTGATCCTGTACTAATAGCCAACCATGTAAGGAGAACAAATGAACTGAAGTCAGAAATTGATATTCCTGATGATGTTGTTATGAAATTCAAACAGTTCTGGATCCATTTTAAGGATTGTCCTCTGAAAGGGAGGAATGCTATTCTACGAGGAATTTGCCCACAAGTATTTGGACTCTTCACTGTCAAGCTGGCAGTTGCATTAACACTTATTGGAGGTGTGCAACATATCCATGCTTCTGGAACAAAGGTACGAGGGGAACCCCACTTACTCTTGGTTGGTGATCCTGGCACAGGGAAATCTCAGTTTTTGAAATTTGCAGCAAAATTAAGTAATAGATCTGTAGTTACCACTGGCACGGGAAGCACCAGTGCTGGATTGACTGTTACTGCAGTGAAGGATGGAGGAGAATGGATGTTGGAAGCTGGAGCCCTTGTTCTTGCAGATGGGGGTTTGTGTTGCATAGATGAATTTGATAGTATGAGGGAACATGACAGAGCAACCATACATGAAGCCATGGAGCAGCAGACCATAAGTGTTGCCAAGGCTGGTCTTGTAACAACGCTCAGCACTAGAACAACAGTGTTTGGTGCTACCAATCCTAAGGGACATTATGATCCTGATCAACCTCTCTCTGTCAACACAACACTCTCTGGTCCTTTATTAAGCAGGTTTGATATAGTCCTTGTGCTCTTGGATACAAAGAATCCTGAATGGGATGCAGTAGTTTCGTCTCATATTCTTAATGAGGCAGAACCAGATGGAACTAGGCAAGATGAAGATCTGGCAAATATCTGGCCTCTTTCTACGCTCAAGAGGTATATTCACTACTTAAAAGAAACCTTCAAACCAGTCCTTACAAGAGAGGCTGAGACAGTCATCTCCAGTTACTATCAACTGCAAAGGAAATCTGCAACTCATAATGCAGCTAGGACAACTGTTCGTATGCTGGAAAGTTTGGTTCGCCTAGCTCAAGCCCATGCAAGGTTGATGTTCAGAAATGAGGTGACTAGATTAGATGCCATCACAGCCATTTTATGCATAGAATCTTCAATGACTACCTCTGCTATAGTGGATTGCATTGGCAATGCTCTGCATTCCAATTTTACTGAAAACCCTGACGAGGAATATACCAAACAGGAGAGGATGATACTAGGAAAATTGGGAATTCATGAATCCTCTGACATTAGCATCATAGAAGGCTGA 1998 0.4294 MDDGEDIKNPSYWEKPMASFLIRNHSDQLRCVVSSPDSKLHYPLFVDFAELMDDDPHLAHLIFTEPARYLQIFDQAAVWAHKIILGESGAEEKWVEKKTINVRINTSGSPLECPESFPSIGRIRVKHRGILLTLKGTVIRSGAIKMHEGEREYMCLKCKKSFLVYPEVEARNSITLPSICQVQGSKPCGGIKFQYVDNTIVCHDYQEIKIQESTQVLGVGVIPRSILVILKDDLVDIVKAGDDVIVSGVLTAKWSSEVKDVRCDLDPVLIANHVRRTNELKSEIDIPDDVVMKFKQFWIHFKDCPLKGRNAILRGICPQVFGLFTVKLAVALTLIGGVQHIHASGTKVRGEPHLLLVGDPGTGKSQFLKFAAKLSNRSVVTTGTGSTSAGLTVTAVKDGGEWMLEAGALVLADGGLCCIDEFDSMREHDRATIHEAMEQQTISVAKAGLVTTLSTRTTVFGATNPKGHYDPDQPLSVNTTLSGPLLSRFDIVLVLLDTKNPEWDAVVSSHILNEAEPDGTRQDEDLANIWPLSTLKRYIHYLKETFKPVLTREAETVISSYYQLQRKSATHNAARTTVRMLESLVRLAQAHARLMFRNEVTRLDAITAILCIESSMTTSAIVDCIGNALHSNFTENPDEEYTKQERMILGKLGIHESSDISIIEG 665
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2402 665 SUPERFAMILY Nucleic acid-binding proteins 41 259 IPR012340 -
Acco06g2402 665 Gene3D - 304 621 IPR027417 -
Acco06g2402 665 PRINTS Mini-chromosome maintenance (MCM) protein family signature 435 448 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco06g2402 665 PRINTS Mini-chromosome maintenance (MCM) protein family signature 349 364 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco06g2402 665 PRINTS Mini-chromosome maintenance (MCM) protein family signature 485 493 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco06g2402 665 PRINTS Mini-chromosome maintenance (MCM) protein family signature 407 421 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco06g2402 665 PANTHER DNA REPLICATION LICENSING FACTOR MCM FAMILY MEMBER 43 644 IPR031327 GO:0003677|GO:0005524|GO:0032508
Acco06g2402 665 FunFam Probable DNA helicase MCM9 286 620 - -
Acco06g2402 665 SMART AAA_5 350 499 IPR003593 GO:0016887
Acco06g2402 665 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 318 625 IPR027417 -
Acco06g2402 665 Pfam MCM P-loop domain 310 513 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco06g2402 665 Gene3D - 147 203 - -
Acco06g2402 665 Pfam MCM AAA-lid domain 534 615 IPR041562 -
Acco06g2402 665 SMART mcm 116 617 IPR031327 GO:0003677|GO:0005524|GO:0032508
Acco06g2402 665 CDD MCM9 311 615 - -
Acco06g2402 665 Pfam MCM OB domain 122 251 IPR033762 -
Acco06g2402 665 ProSiteProfiles MCM family domain profile. 308 511 IPR001208 GO:0003677|GO:0005524|GO:0032508
Acco06g2402 665 Gene3D - 122 252 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2402 Acco-ChrAcco06 20245314 20260230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2402 17 640 Core DNA Replication Machinery Family AT2G14050 76.236 0.0 991