Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2351 ATGGAGAATTACACGTACCCTTCGTACCCTGACTCCGGCGAATCGTCTCCGCGCTCCAGAGAGGTTGAATTCGAGAACCCTCCGCCGTGGGACGACCAGCAACCACCGCCCAATTACAAAGCTAAGTTCATGTGCAGCTATGGCGGGAAGATCCAGCCTCGCAGCCACGACAACCAGCTCTCCTACGTCGGTGGCGAGACCAAGATCCTCGCCGTTGACCTCAACATCAAGTTCGCCGCCATGATTTCCAAGCTCTCTGCCATCTGTGATGGCGCCGATGTCACCTTTAAATACCAGCTCCCCGGAGAAGAACTGGACGCCCTGATTTCCGTCACCAACGACGACGATCTCGAACACATGATGCACGAGTATGATCGCCTGTACCGCGCTTCCGCTAAGCCCGCTCGCATGAGGCTCTTCGTCTTCCCTGCGAATAGTAGCCAGCCATCGAGTTTTGCTTCCGATCAGGACCGCTTCGTGGAGGCTCTGAATACGGGTCCGGGTCCGACTCCTCCAGACCCGGTTAAGCCGGCTCCTGTTCCTGCTGGCAGCAACGTCGACTACCTCTTCGGTCTGGAGAAAGGAGTACCTCCGGCGCAGCCACCGCCTATGGCCGTCAAGTTTCATGACCCTGTTCCTGGACCGGTGGTGCCACCTCTGGAGTACCAAGTAAGAGGCGGACCTGAACGTGTCATCGGGTCGGATCCTTCAGTGAACCCGATTGAAGTTCAAAGGCAGTTACAAAGGATGCAAATTGGGGATCATGATCAGCCAGTGTATAGAAGAAAGAGCGAGGATAATACGGCAGGAGGATATGCGGGCGGAGATTATTATGTTCAGAAATTCGCCGACAAGGCTCCTCCGTCGAATTTGCAGGCCGCAGCACCACCAGCTGGAGGTTATTGGCCGGAAAAACAAGTTCCCAGCGAGGGTTTTCCACCTTCGATGACAGCGTCAAATGGATCCGGAGGAGCAGACCAGCCGGTTTATGTTATCCCACAGCCTGGAACTTTCTATCACGCGCCGCCGGGGGTGCGTCCTCAGGCGACTCAAGGTTACTACGCCGTGCAGCGAATGGTTTCTGATGGCTACCGTGAGCAGCCGGTTTACAGCGCGGCGGCGCCGCCCCGAGCGCCATTTCCATCAGCGGCTCCGGCAACCATGGCACCGGCTCAGCCAGTAAAATCTGCCGCGTATACGGATGGGTTCAACGTGATTCGCTCAACTGGGCAACCGGCAGATAACTCAGCAGCATATGCGCAAGTGGCGTATGATGGTTCGGCAGGGAGACAGTTTTACTATACTGCGCCGGCGGGAATGGTTCATCAGCCACCATACCAAGGGGTTGTTCCGACGGTGGGTGCTGATATAAGAGCTGCCGGAGTACCATTGGGTCAGGATCTTAAAGGGGTCAACAAGGTTTCGCAAGGTTAA 1434 0.5628 MENYTYPSYPDSGESSPRSREVEFENPPPWDDQQPPPNYKAKFMCSYGGKIQPRSHDNQLSYVGGETKILAVDLNIKFAAMISKLSAICDGADVTFKYQLPGEELDALISVTNDDDLEHMMHEYDRLYRASAKPARMRLFVFPANSSQPSSFASDQDRFVEALNTGPGPTPPDPVKPAPVPAGSNVDYLFGLEKGVPPAQPPPMAVKFHDPVPGPVVPPLEYQVRGGPERVIGSDPSVNPIEVQRQLQRMQIGDHDQPVYRRKSEDNTAGGYAGGDYYVQKFADKAPPSNLQAAAPPAGGYWPEKQVPSEGFPPSMTASNGSGGADQPVYVIPQPGTFYHAPPGVRPQATQGYYAVQRMVSDGYREQPVYSAAAPPRAPFPSAAPATMAPAQPVKSAAYTDGFNVIRSTGQPADNSAAYAQVAYDGSAGRQFYYTAPAGMVHQPPYQGVVPTVGADIRAAGVPLGQDLKGVNKVSQG 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2351 477 PANTHER OS05G0427100 PROTEIN-RELATED 9 367 - -
Acco06g2351 477 CDD PB1_UP2 44 142 - -
Acco06g2351 477 MobiDBLite consensus disorder prediction 1 15 - -
Acco06g2351 477 Pfam PB1 domain 56 143 IPR000270 GO:0005515
Acco06g2351 477 MobiDBLite consensus disorder prediction 288 329 - -
Acco06g2351 477 MobiDBLite consensus disorder prediction 1 38 - -
Acco06g2351 477 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 60 144 - -
Acco06g2351 477 SUPERFAMILY CAD & PB1 domains 56 151 - -
Acco06g2351 477 Gene3D - 61 143 - -
Acco06g2351 477 SMART PB1_new 55 144 IPR000270 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2351 Acco-ChrAcco06 19306112 19307545 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2351 39 165 MAP Kinase Kinase Kinase AT5G57610 42.537 6.96e-27 112
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2351 06 19306112 19307545 Acco06g2351 06 19306112 19307545 CCT
Acco06g2351 06 19306112 19307545 Acco06g2351 06 19306112 19307545 ECH