Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2328 ATGAGTCCTGTTTCAGCCTCTTTATTATTATTGGCCTGTCTCTTTGTAACAGGCCATGGTTCTGATGAGAGTGAACCCTGTAAAGACAGTTCTTCTTCTGATAGATCATTTTTGTACAGTTTTGCTATTGCTTATGTTTGTTCAGCAACCTCAGTTATAGTTTCTTTCATGTACTTTTGCCAACCTTGGAGAGCCTTGAAGAGAAGGAAGAGAAATGCTTTATCTTCTTTTAGGAGAAAGAGACAGAGCATTCAATCTCATACTACGCCACTCGTTGAGTTGCTGCCATTAACATTGCAAGAGCAAGGAATCAAAGAGCTCTCAGCATTATTAGAGAGGTTGATTCCAAGAATAAACTTTGGGGAACTATGTGAGGCAACTAATTACTTCAGCACAGACTATGTCTTAGGATTTGGAAGGACAGGGATTATGTACAAGGCCAAGCTACCAAACAACAAATACTGCTTCTTGGCAGTTAAAAGACTCTATGATTCTCAACTGTACAAGACTGAGTTCTTGCTAGAAACTATAATCCCAGGTAGTCACAGACACCACAACATAGTCCCTCTTTTTGGATTCTGTCTGGACAAAAAGGAAAGGGTTCTGGTTTATGAGTACATGTCCAATGGAAAACTCCAAGATTGGCTACTTCAATCTGATGATAATGGACCTCATCATCAAGCTATGGTATTGGAATGGCCTGTGAGGGTTTATATTGCTCTTGGCCTAGCCAGAGGCTTGTCTTGGCTTCACAACAACTGCAACATTGTGCATCTCAATCTGAGTTCAGAGTGTGTTCTTCTCAGCAAAGATTTTGAACCCAAAATTTCAAACTTTGAGAAGGCCAAGTTCATTAATCAGATCATTAACGATGATTTGAGGATGAAGCTGGATAAGATAAACGGGCTTGCAGAGAAAGGTTCTATGGAGAAAGATGTTTATGGCTTTGGAATAATTATTTTTGAGCTCATCACAGGGAAGAGACTGAATCAAACCACTGATGATTCTTCTGACAATGTTGGTCGTCGCTGTACTAAGTTGTTTAGTGGTGATTGTGATTTTTACAGTGTCATTGATGAATTTCTTATTGGGAAAGGATTAGATGAGAAAATATTTGGTCTGATTGAAATTGCATGTGATTGTGTTAAGCCTTCTCTGGCACAGAGGCCTAAGATGGGTGATGTGCATAAAAGAATAAGAGGTTTGTGGGACGGGTATGGACGCATATCTGGTACTGCTAGTCTCAAGCCATCTACGGTTTGTCCTGTGGGGGTAAAATGGGACAATGAAATTGAATGCCTTCACTGA 1308 0.3998 MSPVSASLLLLACLFVTGHGSDESEPCKDSSSSDRSFLYSFAIAYVCSATSVIVSFMYFCQPWRALKRRKRNALSSFRRKRQSIQSHTTPLVELLPLTLQEQGIKELSALLERLIPRINFGELCEATNYFSTDYVLGFGRTGIMYKAKLPNNKYCFLAVKRLYDSQLYKTEFLLETIIPGSHRHHNIVPLFGFCLDKKERVLVYEYMSNGKLQDWLLQSDDNGPHHQAMVLEWPVRVYIALGLARGLSWLHNNCNIVHLNLSSECVLLSKDFEPKISNFEKAKFINQIINDDLRMKLDKINGLAEKGSMEKDVYGFGIIIFELITGKRLNQTTDDSSDNVGRRCTKLFSGDCDFYSVIDEFLIGKGLDEKIFGLIEIACDCVKPSLAQRPKMGDVHKRIRGLWDGYGRISGTASLKPSTVCPVGVKWDNEIECLH 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2328 435 Pfam Protein tyrosine and serine/threonine kinase 134 329 IPR001245 GO:0004672|GO:0006468
Acco06g2328 435 SUPERFAMILY Protein kinase-like (PK-like) 120 402 IPR011009 -
Acco06g2328 435 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 27 398 - -
Acco06g2328 435 ProSiteProfiles Protein kinase domain profile. 130 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2328 435 Gene3D Transferase(Phosphotransferase) domain 1 207 406 - -
Acco06g2328 435 Gene3D Phosphorylase Kinase; domain 1 96 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2328 Acco-ChrAcco06 18894193 18896219 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2328 109 410 Receptor kinase-like Gene Family AT1G69990 33.121 1.42e-45 164
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xa Acco06g2328 PK_Tyr_Ser-Thr 6.1e-21 CL0016