Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2304 ATGACGACGCTCCACCCCACCGTGGAGTACGACGCTGACTCCGTCGCTTCCTCCCCTCGCTCCGACCATTTTCATGAACCCTTGCATAGTGTCCGCTTCATGTGCAGCTTCGGCGGTAGAATATTACCCCGCCCCCGCGACAACCAGCTCCGATACGTCGGTGGCGACACCCGAATTGTAGCCCTCCATCGCTCAATCTCCTTCTCCGCCCTCCTCCTCAGGCTTTCTAAGCTCTCAGGCACTACCAATATAACAGTGAAGTATCAGCTTCCCAATGAGGATCTGGATGCTTTGATTTCCGTTACGACGGACGAGGATGTGGAGAACATGATGGAAGAGTACGAGCGGATCGCACATAATCAAGACCCGAGGTCGGCTCGGCTCCGGCTATTTTTGTTCGTTAAGGAAGATGATTCTAGAACCAACAGTATCAGTTCCCTACTGGACGGTTCAGCCCATCGCGAGAGCTGGTTTGTCGATGCCCTAAACAGTGGCATGGGTCGGCTCGAGCGAGGCCCTTCCGAGGCGTCTTCCATGCTTTCTGAAGTGCCTGATTATCTCTTCGGGTTGGAACACTCCGACGAGGTCCAAACCCGAGAATCTAGGTTGAAATTCCGACCCGTTGCAAACGACAACGTCTCCTTTTCGGATCCTGGCTCGCCGGCTCCGGTTGTTTCGTCTCCGTTTTGCTCCACCTCATCGGCGGCAAATGTGCCGTCCATGCCGAACCTCCCGCCGGTTAAAACCAAACCGGATAATCCGGTTCCTGTCATGGAATCGAAAGAAAATCACATTGATGGTTTTCAAACAGGAAATCCAGGTGGCCAGATACCTCACTACCCGCCGGGTTCTACTCATCCCGGTCACTCTGTACAACCTGTTCCTGTTTACTACATTCCAGGTCCTGTTCCGGTTCAACATGGGCAGGTACCGGTCCAACCCGTTACAATTCAGGGGCCTTATGTTCAGCCATACCCGGCGGTGGTGCCAGCTCAGGTGCCAATGGGTTATCATCATGTGGTTCCAGGTTCGGCCGCCCAACCATACGGTGGAGGGATGAGGCCCGTGGGTGGTGTGCATCCATACGAAGCGGCGGCAAGGGTTTTTCCAGACGGCGTCGGGCGGCAGCTCGCGTATCAAGCAGTTCCGAATTCCGGCGGTGCCCCTGTTTATCCGGTGATGAATATGGCACGTGGGGACGAATCGCAGAGAACTGGAGCGGATTATGGGACGGGTCGGGGCCCCAACATGGAATGA 1257 0.5537 MTTLHPTVEYDADSVASSPRSDHFHEPLHSVRFMCSFGGRILPRPRDNQLRYVGGDTRIVALHRSISFSALLLRLSKLSGTTNITVKYQLPNEDLDALISVTTDEDVENMMEEYERIAHNQDPRSARLRLFLFVKEDDSRTNSISSLLDGSAHRESWFVDALNSGMGRLERGPSEASSMLSEVPDYLFGLEHSDEVQTRESRLKFRPVANDNVSFSDPGSPAPVVSSPFCSTSSAANVPSMPNLPPVKTKPDNPVPVMESKENHIDGFQTGNPGGQIPHYPPGSTHPGHSVQPVPVYYIPGPVPVQHGQVPVQPVTIQGPYVQPYPAVVPAQVPMGYHHVVPGSAAQPYGGGMRPVGGVHPYEAAARVFPDGVGRQLAYQAVPNSGGAPVYPVMNMARGDESQRTGADYGTGRGPNME 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2304 418 MobiDBLite consensus disorder prediction 1 21 - -
Acco06g2304 418 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 50 135 - -
Acco06g2304 418 CDD PB1_UP2 34 133 - -
Acco06g2304 418 ProSiteProfiles PB1 domain profile. 30 135 IPR000270 GO:0005515
Acco06g2304 418 SMART PB1_new 45 135 IPR000270 GO:0005515
Acco06g2304 418 PANTHER OS05G0427100 PROTEIN-RELATED 12 333 - -
Acco06g2304 418 Pfam PB1 domain 46 134 IPR000270 GO:0005515
Acco06g2304 418 Gene3D - 51 136 - -
Acco06g2304 418 SUPERFAMILY CAD & PB1 domains 47 142 - -
Acco06g2304 418 MobiDBLite consensus disorder prediction 398 418 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2304 Acco-ChrAcco06 18523288 18524639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2304 20 133 MAP Kinase Kinase Kinase AT3G46920 48.246 3.63e-31 124