Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2299 ATGGAAACCGCAAACACTGTTCCATTATCTCTTCTCTCCTTCTTCATCCTATGTTTTCTTGCTCTGTTTTCCCATGCAGCCATTTTCGAGTCAATCACTCAGGGCCAGTTGATCAGAGACGACGACCGAGTCGTATCACATAGGCTCAATTTCGAGTTGGGTTTCTTCAGTTCGCAAGATTCCCGACGGCGATACGTCGGGATTTGGTACGACGTCCCCGGACGGTCGGTGATATGGGTCGCAAACAGAGAAAACCCCATTGAAGACACAGAAGGAGCTATAACAATCAGCAAAGATGGAAACTTGGTCATCTTGGACGGGAAAAATAACATAGTCTGGTCCAGTAACGTGTCAATCTCAATCCCGAGAAACAAGTCGTTGAAGGCTATTCTCAGGGACGACGGGAATCTTATTCTTTTGAGTATTGCAAATAACACAGTATGGCAGAGCTTTGATTATCCAACAGATACATTTCTACCAGGTATGATTCTGCCAGTAAATGAAACAAAAGGAGAGGTACGTTCTCTTGTGTCTTGGAAATCTGCCGATGATCCTTCACCTGGGAACTTCACAATGGGACTTGATCCTCGAGCAGCACTCCAGATAGTGATTTGGGAAGGAAGCAAAAGGAGATGGAGAAGTGGGTATTGGGATGGTAGGATATTTACAGGCGTGAACATGACAAGTAGTTATCTTTATGGTTTTAGACTCAACGTGAATGATGACCAAACCAGGTACTTAACTTATAATCCCTTGAATAGTTCTGAGAAGCTAAGGTTTCAGATAGGTTGGGATGGGACTGAAAGGAAGATCATTTGGGGAGAAGGTGAGAGAAAGTGGATTACTGTGGAAACAGAGCCTTATAATGAATGTGAAATGTATAACAAGTGTGGGAATTTTGGGGTATGTTGTTTATCATCTTCACCTACCTGTAAATGCTTAAAGGGGTTTGAGCCAAAGGATTGGGATCAGTGGCAGAGAGGGAACTGGTCAGGTGGGTGTAAAAGGAAAACCCCATTAAAGAATGAGATTGAAGCTAGTAATGGAACAGACAAAAATGTTGGAGAAGATGGGTTCTTGATGATGAAGTGTTTGAAATTGCCTGATTCTGTAAATTTGGTGGCTTCTAGTAACTATGGCATTGATGTTGCCAGAGAGAATTGTGAGAATCATTGTGTTTCCCATAGTAATTGTACTGCTTATGCTTATGTTATTGGAATTGGATGCATGATTTGGCATGGGGAGCTAGTTGATATTGACCTCTTTGAAAATGGAGGAAACATGTTGTTCATCCGCCTTGCTGCTTCTGAATTAGGTAGTACGAGTAAAAAGACTAAGGTAGTGATAATAGCAGCAGTTATGTCAGGAGTAATCTGCCTAGGGCTATGCGTTTGGCTAGCATGTATATTTCAAAGAAAACGCAAGGCTTCAGGAGGCAAGAATGAGGATGTCCCTATGCTTGTTACAAACAAGAGTAGACAGTCTTCAGTAGATGTTTCGGGATCGACTGAGTTTAGCTTGGAAGGGAGCAACCAACTAAGTGGGCCAGAATTACCATTCTTCAATTTCAATTGCATTGCAATAGCCACGAACAATTTCTCAGAAGAAAATAAACTCGGACAAGGCGGATTTGGTCCTGTCTACAAGGGAAAGCTTCGAGGAGGAGAAGAAATAGCAGTCAAGAGACTTTCGAGATATTCGGGCCAAGGATTAGAGGAGTTCAAGAATGAGATCGTACTGATAGCCAAATTACAACATAGAAATTTGGTCAGACTCTTGGGATGTTCCACCCAAGAGGAGGAGAAGTTGCTGGTATATGAATACTTGCCAAACAAAAGCTTGGATTGTTATTTATTTGATCCAGAAGAGCAGAAAAAATTAGACTGGAAAAAACGATTTGAAATCATTGAAGGAATTGCAAGAGGGATTCTTTATTTGCACCGGGATTCTAGACTTACAATTATTCATCGTGATCTAAAAACAAGCAATATTTTGTTGGATGAAAACATGAATCCAAAAATTTCAGACTTTGGCTTGGCTAGAATATTTGGAGGAAACCAAGACGAAGCTAGTACAAATAGAGTAGTGGGTACATATGGTTATATGGCACCAGAATATGCAATGGAAGGCTTATTTTCAGGCAAATCAGACGTTTATAGTTTTGGTGTATTGCTACTTGAGATTGTCAGTGGTCGTAAGAACACAAGCTTCCATGATAAAGATGGCTCAAGTTTTATAGGACAAGCATGGCACCTATGGAATGAAGAGAGAGGGATGGAGCTAGTGGAACCCACATTCCGAGATTCGGCCCCGAGAAGAAAAGCCTTGAGATGGATACAGATAGGGATGTTGTGTGTGCAGGATTATGCAGGAGACAGACCAAGCATGTCTAATGTGGTTCTGATGTTGGAGAGTGAATCAATCGCTCTTCCAAGTCCCAAACAACCTCTTCTGATTTGCATGAGTTCTGAGGATAAAGATGTCCATATAGAAGAGCCTCTTGATGTTTCCTCAAATGGTTTGACTATAACAAGGGCTCTAGGCAGATAG 2550 0.4165 METANTVPLSLLSFFILCFLALFSHAAIFESITQGQLIRDDDRVVSHRLNFELGFFSSQDSRRRYVGIWYDVPGRSVIWVANRENPIEDTEGAITISKDGNLVILDGKNNIVWSSNVSISIPRNKSLKAILRDDGNLILLSIANNTVWQSFDYPTDTFLPGMILPVNETKGEVRSLVSWKSADDPSPGNFTMGLDPRAALQIVIWEGSKRRWRSGYWDGRIFTGVNMTSSYLYGFRLNVNDDQTRYLTYNPLNSSEKLRFQIGWDGTERKIIWGEGERKWITVETEPYNECEMYNKCGNFGVCCLSSSPTCKCLKGFEPKDWDQWQRGNWSGGCKRKTPLKNEIEASNGTDKNVGEDGFLMMKCLKLPDSVNLVASSNYGIDVARENCENHCVSHSNCTAYAYVIGIGCMIWHGELVDIDLFENGGNMLFIRLAASELGSTSKKTKVVIIAAVMSGVICLGLCVWLACIFQRKRKASGGKNEDVPMLVTNKSRQSSVDVSGSTEFSLEGSNQLSGPELPFFNFNCIAIATNNFSEENKLGQGGFGPVYKGKLRGGEEIAVKRLSRYSGQGLEEFKNEIVLIAKLQHRNLVRLLGCSTQEEEKLLVYEYLPNKSLDCYLFDPEEQKKLDWKKRFEIIEGIARGILYLHRDSRLTIIHRDLKTSNILLDENMNPKISDFGLARIFGGNQDEASTNRVVGTYGYMAPEYAMEGLFSGKSDVYSFGVLLLEIVSGRKNTSFHDKDGSSFIGQAWHLWNEERGMELVEPTFRDSAPRRKALRWIQIGMLCVQDYAGDRPSMSNVVLMLESESIALPSPKQPLLICMSSEDKDVHIEEPLDVSSNGLTITRALGR 849
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2299 849 PIRSF SRK 1 849 IPR024171 GO:0004674
Acco06g2299 849 Gene3D - 26 151 IPR036426 -
Acco06g2299 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 499 608 - -
Acco06g2299 849 Pfam PAN-like domain 355 419 IPR003609 -
Acco06g2299 849 Gene3D Phosphorylase Kinase; domain 1 508 608 - -
Acco06g2299 849 Gene3D Transferase(Phosphotransferase) domain 1 609 810 - -
Acco06g2299 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 24 151 - -
Acco06g2299 849 SMART ntp_6 354 433 IPR003609 -
Acco06g2299 849 SUPERFAMILY Protein kinase-like (PK-like) 518 828 IPR011009 -
Acco06g2299 849 SUPERFAMILY alpha-D-mannose-specific plant lectins 77 185 IPR036426 -
Acco06g2299 849 ProSiteProfiles Bulb-type lectin domain profile. 29 152 IPR001480 -
Acco06g2299 849 ProSiteProfiles PAN/Apple domain profile. 354 434 IPR003609 -
Acco06g2299 849 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 609 811 - -
Acco06g2299 849 ProSiteProfiles Protein kinase domain profile. 533 818 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2299 849 SMART serkin_6 533 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2299 849 SMART blect_4 29 154 IPR001480 -
Acco06g2299 849 CDD B_lectin 51 154 IPR001480 -
Acco06g2299 849 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 14 795 - -
Acco06g2299 849 CDD STKc_IRAK 539 804 - -
Acco06g2299 849 CDD PAN_AP_plant 351 434 - -
Acco06g2299 849 CDD EGF 290 318 - -
Acco06g2299 849 Pfam S-locus glycoprotein domain 212 320 IPR000858 GO:0048544
Acco06g2299 849 Pfam Protein tyrosine and serine/threonine kinase 536 801 IPR001245 GO:0004672|GO:0006468
Acco06g2299 849 ProSitePatterns Serine/Threonine protein kinases active-site signature. 654 666 IPR008271 GO:0004672|GO:0006468
Acco06g2299 849 Pfam D-mannose binding lectin 77 180 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2299 Acco-ChrAcco06 18467762 18470926 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2299 491 847 Receptor kinase-like Gene Family AT4G23140 53.297 8.29e-125 389
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Acco06g2299 PK_Tyr_Ser-Thr 1e-48 CL0016