Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2295 ATGGCAGAAGAGTTTGAAGCTGCTGGGATTTACGGTGGGAATTGGTGGATTAATAATATGAATACTTGTTCTTTATCATCATCGTCACTCTGTTCTATTGCTGCCAATAACGATTATGGAGGCAGCAACTTAAGTTGTACTGATTGGCAAACTCATCATAATCTTATGGATCTCAAGTCGCCTTTATTGTTTTCTCATCACGATGAGCAGAAGCAAAATCATCAGAATGAATCATCACCATCATCAGCTTCTGAAAATAACCGAAACATATTGATTGATTCCTCCTTGGGCTTCCCCCTCCCTCCTTCATCAACTTCTTCTTTACTGGGGAGACTAGAAAGCAATTTCCAATGTGTGATTGAAGAAGAAGGTGGGGGTGTAGATTCTTGCAATAATTCAGAAATGAAAAGAAGCATGAACCCAGAATTTGTCATAGATCATGAACAGAATCTGAGTTATGGGATGTATGATGATGATGATGATGAACACAATATTGGTCTTCATTTTCAGCAGCCAGAGGATCTCTCGCTTTTCACCAACCCTTCCGTGGCTTATTGTAGCTATGATTCAACCAATCAGGTTACGCCACCAAGTTGGTCCAAAGCCTCTGCTGGTCACTTTTTGAAGCCTTATTCAATACCAAAGCAGCACCAGGTCGGTGAAGGATTCCACCTTTTGAAGCCTTATTCAACTGATCATGTTCTTGTTTCTTCATCCCCGCAATCTCAAACTTTTCAACACAAACCCAGTCGTTCACCCCTCTCAACCAAGCACAAAAGAGAAGAAGCTCCTGTTAGTAGTGAAGAACAACCAGCTGAATTATTCAAAAGGCCCAGAATTGAAACCCCTTCACCACTACCAACTTTTAAGGTTCGGAAAGAAAAGTTAGGGGACCGAATCACAGCTCTTCAGCAATTAGTGTCACCTTTTGGAAAGACGGACACAGCATCTGTGCTTCACGAAGCCATCGAGTACATCAAGTATCTTCATGATCAAGTCAGCGTTCTGAGTGCTCCGTATTTGAACAATAACACACCTTCTGTTCATCAAAACTATCAGGGTCGTGATGAGAAAGAATGGAAAGATTTGAGAAGTCAAGGGTTGTGTTTGGCGCCGATATCGAGCACATTCTCACTTGCTAACTATGAGATTATGGCTTCTGAGTTATGGACTCATCATGCTTATGAAGGGCCTCATCTCTTGATGTAG 1209 0.4169 MAEEFEAAGIYGGNWWINNMNTCSLSSSSLCSIAANNDYGGSNLSCTDWQTHHNLMDLKSPLLFSHHDEQKQNHQNESSPSSASENNRNILIDSSLGFPLPPSSTSSLLGRLESNFQCVIEEEGGGVDSCNNSEMKRSMNPEFVIDHEQNLSYGMYDDDDDEHNIGLHFQQPEDLSLFTNPSVAYCSYDSTNQVTPPSWSKASAGHFLKPYSIPKQHQVGEGFHLLKPYSTDHVLVSSSPQSQTFQHKPSRSPLSTKHKREEAPVSSEEQPAELFKRPRIETPSPLPTFKVRKEKLGDRITALQQLVSPFGKTDTASVLHEAIEYIKYLHDQVSVLSAPYLNNNTPSVHQNYQGRDEKEWKDLRSQGLCLAPISSTFSLANYEIMASELWTHHAYEGPHLLM 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2295 402 CDD bHLH_AtbHLH_like 286 337 IPR045239 -
Acco06g2295 402 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 67 378 - -
Acco06g2295 402 MobiDBLite consensus disorder prediction 236 251 - -
Acco06g2295 402 FunFam Transcription factor bHLH123 family 290 352 - -
Acco06g2295 402 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 290 342 IPR036638 GO:0046983
Acco06g2295 402 MobiDBLite consensus disorder prediction 255 272 - -
Acco06g2295 402 MobiDBLite consensus disorder prediction 236 272 - -
Acco06g2295 402 Gene3D - 290 346 IPR036638 GO:0046983
Acco06g2295 402 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 280 329 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2295 Acco-ChrAcco06 18412328 18414953 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2295 254 391 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G61660 54.545 1.44e-41 149