Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2292 ATGGGTGAAGAGGGAGTTAGAAAGGCTATAACAGACCAGGATTCGCCGGAATCTTTCGCCGTAGGTTCCAGTATACCTCAAGCTGTCAAGCTTATATCTTCCTTGATTTCTCTTTCCCATTCAGTCAGGGTCTTCGCGGCGAAATGGCAACTAATTCGGAGCAAACTCGAGGAGCTCCATTCAGGGCTAATCGCCGCCGAGAACTGCGATTCCGGCGAGAACCCATCGCTCTCCGGTCTGGTCCCTGCGATTCTAACCACCGTCAACGACTGCCACGATCTCGCTCGCCGCTGCGTTGATCTTTCGTACAGCGGGAAGCTTTTGATGCAGAGCGATTTGGATGTTAGCTTCGCCAGGCTCGCTTGTCACGCGAAGAAACTATTAGAGATATACTCAGCTGGCATTTTGACTCACAAGTACGCTCTCGTTGTTTCGAGGCCAAGTCTCGGAGCTTGTAAAGATGATATGAGGTTTTACATGAGGGATTTGCTGACCAGAATGAAGATTGGCGATGTGGAAATGAAGAGGCAGGCTCTAACTAATCTTCACGAAGCTGTTATTGAAGATGAAAAGTATGTGAAAGTGATTGTGGAAATAGGAGAAATTGTTCATCTTCTTGTAAATTTTCTTGATTCGCCGGAGTTGGAAATCCAAGAAGAATCTGCCAAGGTTCTTTATGTAATCGCAGGCTTTGATTCTTACAGAGGTGTTCTGATCGCATCTGGGATTATCGCGCCTCTGATCCGAGTTTTGGAATGTGGGAGTGAGTCAGGAAAAATCGGGTCTTCCAGGTGTTTGATGAAATTAACGTTTAATTCAGACAATGCTTGGTCGGTTTCAGCTCACGGAGGAGTCACGTGCTTGCTCAAAATCTGCTCTGATGGAGAACCGAAAGGAGAATTGGTTGGTCCTGCTTGTGGGGTACTGAGAAATCTTGTAGGTGTTGAAGAAATAAAGAGATTCATGGTTGAAGAAGGTGCGGTTTCTACATTTATCAGGCTGGTGAAATCCAGGGACGAAGCGATTCAGGTAAATTCCATTCAATTTATTCAAAGTATAGCCTCTGGAGATGAACAGATTAGGCAAATGGTGATTAGAGAAGGTGGAATTCGAACCATATTACGGATTCTTGATCCTAAATGGTCATGTTCTTCAAAAACCAGGGAGATAGGAATGAGAGCTATAGAAAACTTGTGTTTTTCTTCATCTAGTTCTGTAAGTACATTAATAAGTTATGGGTTTGTGGATCAACTGATGTATTATATCCGTAATGGGGAGGTTTCAATCCAAGAATTGGCTCTGAAAGTAGCGTTTAGATTCTGTGGAACATCAGAGGAGGCTAAGAAAGCCATGGGAAATGCAGGTTTCATGCCAGAGCTTGTTAAGTTTCTGAATGCAAAATCATTTGAAGTTAGAGAAATGGCAGCTGAGTCACTCTCTGCCATGGTTATGGTGCCCAAGAACAGGAAGAAATTTGTGCAGGATGACCAAAACATAGCTCTTCTTCTCCAACTGCTTGATCCAGAAGAGGGAAATTCAAGTCACAAGAAGTTCTTAATCTCTATCTTAATGTCATTAACAAGTTGTAACAGTGGGAGGAAGAAGATTGTGAGTTCTGGGTATGCCAAAAACATAGAGAAACTTGCAGAAGCTGAGGTTTCATCAGATGCCAAGAGACTTGTGAGAAAGCTATCCACAAACAGATTCCGCAGTATGTTGAGTGGAATCTGGCACTCATGA 1740 0.4362 MGEEGVRKAITDQDSPESFAVGSSIPQAVKLISSLISLSHSVRVFAAKWQLIRSKLEELHSGLIAAENCDSGENPSLSGLVPAILTTVNDCHDLARRCVDLSYSGKLLMQSDLDVSFARLACHAKKLLEIYSAGILTHKYALVVSRPSLGACKDDMRFYMRDLLTRMKIGDVEMKRQALTNLHEAVIEDEKYVKVIVEIGEIVHLLVNFLDSPELEIQEESAKVLYVIAGFDSYRGVLIASGIIAPLIRVLECGSESGKIGSSRCLMKLTFNSDNAWSVSAHGGVTCLLKICSDGEPKGELVGPACGVLRNLVGVEEIKRFMVEEGAVSTFIRLVKSRDEAIQVNSIQFIQSIASGDEQIRQMVIREGGIRTILRILDPKWSCSSKTREIGMRAIENLCFSSSSSVSTLISYGFVDQLMYYIRNGEVSIQELALKVAFRFCGTSEEAKKAMGNAGFMPELVKFLNAKSFEVREMAAESLSAMVMVPKNRKKFVQDDQNIALLLQLLDPEEGNSSHKKFLISILMSLTSCNSGRKKIVSSGYAKNIEKLAEAEVSSDAKRLVRKLSTNRFRSMLSGIWHS 579
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2292 579 SUPERFAMILY ARM repeat 161 560 IPR016024 -
Acco06g2292 579 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 23 578 - -
Acco06g2292 579 SMART arm_5 444 484 IPR000225 GO:0005515
Acco06g2292 579 SMART arm_5 315 355 IPR000225 GO:0005515
Acco06g2292 579 SMART arm_5 231 271 IPR000225 GO:0005515
Acco06g2292 579 SMART arm_5 357 400 IPR000225 GO:0005515
Acco06g2292 579 SMART arm_5 189 230 IPR000225 GO:0005515
Acco06g2292 579 SMART arm_5 272 314 IPR000225 GO:0005515
Acco06g2292 579 Gene3D - 160 568 IPR011989 -
Acco06g2292 579 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 283 327 IPR000225 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2292 Acco-ChrAcco06 18381175 18382914 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2292 143 455 U-box Gene Family AT2G23140 26.019 4.60e-14 73.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2292 06 18381175 18382914 Acco06g2292 06 18381175 18382914 CCT