Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2290 ATGCCGAATTTCACTTTCTATCAACGAGTTTCTAGAACTTTCCATGAATCCTCCTCCCTTTCCAAGCTTCTCGTGCTTTTCACCGTCAGTGGTGGGACAGGGGCCCTTGTGGCTTATGCAGAAGCAGATCGAAGCAATAATGGAGCATATATTGGTTCATCAGAAACAGTTTCGGAAAAGAAAAAGGTGGTGGTGCTCGGAACTGGCTGGGCAGGCACAAGTTTCTTGAGGAACCTAAACAACCCCAGATATGAGGTTATGGTGGTCTCGCCTCGCAACTATTTTGCTTTCACTCCTCTTTTGCCCAGCGTCACTAGCGGTACTGTCGAAGCGCGCAGCATAGTTGAACCTATTCGTAATATTTTCCGGAAGAAAAGAATGGACATTGAATATAGTGAAGCAGAGTGTCTCAAGATTGATGCAGAGAATAGGAAAATTTACTGTCGGTCCAGTTTAGACAACCATAAGGACGGGAAAGAAGAATTTGTCGTGGACTATGATTACCTAATCATAGCCGTGGGAGCTAATGTCAACACATTCAACACTCCCGGAGTTGAGGAGCATTGCCATTTCTTAAAGGAAGTAGAAGATGCCCAGAAGATTAGGAGAACAGTCATTGATTGTTTTGAGAGAGCAAGCCTGCCAATTGTAAGTGACGAAGAGAAGAAGAGGATTCTTCATTTTGCAATAGTTGGAGGTGGCCCAACCGGGGTGGAGTTTGCAGCCTCCCTTCATGACTTTGTCAATGAGGATTTGGGCAAGTTATATCCTAGGGTAAAAGATTTAGTCAAGATCACGCTTCTGGAGGCTGGAGATCATATTCTTAGTATGTTTGACAAGAGAATTACTGCATTTGCTGAAGACAAGTTCAAGAGAGATGGCATTGATGTGAAAACAGGATCCATGGTGGTGAAGGTGTCGGATAAAGAAATTTCTACCAAAGAATTGAAAAATGGAGGAGAGATTACAAAAATTCCATATGGAATGGCTGTGTGGTCAACTGGTATTGGCACTCGTCCATTTATCAAAGATTTCATGAAGCAAATTAACCAGGCTAACAGGCGTGCCTTGGCTACTGATGAATGGTTGAGAGTTGAAGGGTGTGACAATGTTTATGCTCTTGGTGATTGTGCTACCATAAACCAGCGAAAAGTCATGGGAGATATTGCCGCGATTTTTAAGAAGGCAGATAAAGACAACTCAGGAACGCTTACAGTGAGAGAATTTCAAGAGGTGATTGACGATATCTGTGAAAGGTACCCTCAGGTGGAGCTGTATCTGAAGAGCAAGCAGATGCGCAGCATTGTTGATCTGTCGAAGGAAGCTAAGGGAGATGTTAACAATGAATCAACTGAACTGAATATTGAAGACTTCAAAGCGGCATTGTCCAATGTGGATTCCCAGATGAAATTTCTTCCTGCTACAGCACAGGTTGCATCTCAGCAGGGAGCATACCTGGCCAAGTGTTTTAATCGGATGGAGGAATGCGAAAAGAATCCAGAGGGTCCTCTTAGGTTCAGGGGAGAAGGTCGTCACCGCTTCAAACCCTTTAGGTACAAGCATTTGGGACAGTTTGCTCCACTTGGAGGAGAGCAGACAGCAGCGCAGCTTCCTGGGGATTGGGTATCAATTGGCCAAAGTTCCCAATGGTTATGGTATTCTGTCTATGCAAGCAAGCAAGTGAGCTGGCGTACGAGGGCCTTGGTGGTGTCAGACTGGATGAGACGCTTTGTCTTCGGTAGGGACTCGAGTCAAATCTGA 1761 0.448 MPNFTFYQRVSRTFHESSSLSKLLVLFTVSGGTGALVAYAEADRSNNGAYIGSSETVSEKKKVVVLGTGWAGTSFLRNLNNPRYEVMVVSPRNYFAFTPLLPSVTSGTVEARSIVEPIRNIFRKKRMDIEYSEAECLKIDAENRKIYCRSSLDNHKDGKEEFVVDYDYLIIAVGANVNTFNTPGVEEHCHFLKEVEDAQKIRRTVIDCFERASLPIVSDEEKKRILHFAIVGGGPTGVEFAASLHDFVNEDLGKLYPRVKDLVKITLLEAGDHILSMFDKRITAFAEDKFKRDGIDVKTGSMVVKVSDKEISTKELKNGGEITKIPYGMAVWSTGIGTRPFIKDFMKQINQANRRALATDEWLRVEGCDNVYALGDCATINQRKVMGDIAAIFKKADKDNSGTLTVREFQEVIDDICERYPQVELYLKSKQMRSIVDLSKEAKGDVNNESTELNIEDFKAALSNVDSQMKFLPATAQVASQQGAYLAKCFNRMEECEKNPEGPLRFRGEGRHRFKPFRYKHLGQFAPLGGEQTAAQLPGDWVSIGQSSQWLWYSVYASKQVSWRTRALVVSDWMRRFVFGRDSSQI 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2290 586 Gene3D - 53 424 - -
Acco06g2290 586 Gene3D - 425 585 - -
Acco06g2290 586 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 430 585 - -
Acco06g2290 586 FunFam External alternative NAD(P)H-ubiquinone oxidoreductase B1, mitochondrial 52 413 - -
Acco06g2290 586 PANTHER NADH DEHYDROGENASE 57 586 IPR045024 GO:0003954|GO:0006116
Acco06g2290 586 SUPERFAMILY FAD/NAD(P)-binding domain 60 279 IPR036188 -
Acco06g2290 586 SUPERFAMILY EF-hand 342 473 IPR011992 -
Acco06g2290 586 ProSiteProfiles EF-hand calcium-binding domain profile. 384 419 IPR002048 GO:0005509
Acco06g2290 586 Pfam Pyridine nucleotide-disulphide oxidoreductase 61 383 IPR023753 GO:0016491
Acco06g2290 586 SUPERFAMILY FAD/NAD(P)-binding domain 221 381 IPR036188 -
Acco06g2290 586 ProSitePatterns EF-hand calcium-binding domain. 397 409 IPR018247 -
Acco06g2290 586 PRINTS FAD-dependent pyridine nucleotide reductase signature 166 184 - -
Acco06g2290 586 PRINTS FAD-dependent pyridine nucleotide reductase signature 227 245 - -
Acco06g2290 586 PRINTS FAD-dependent pyridine nucleotide reductase signature 26 45 - -
Acco06g2290 586 SMART efh_1 388 416 IPR002048 GO:0005509
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2290 Acco-ChrAcco06 18352581 18356100 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2290 1 586 Chloroplast and Mitochondria Gene Families AT4G21490 72.835 0.0 875
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2290 06 18352581 18356100 Acco06g2290 06 18352581 18356100 CCT