Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2253 ATGGATGTTGGATCTATAGTAAGCATCCTGAGCTGCTTGTGCTCTCAGAACTCGCTGCGACAATCTCTTGAACGACGGTTTAGGCATCTTAGGAAACCAAGAAAGAATCTGAACAAGCTAAAAGAGCTAGTGGAACAGCTAGATGCTAGGAAATCAGATATAAACACTAAACTAGATCAAATGTGGCTGGAAAAAGGGATGAATCCGCGAGAAGAGGTGAAGCTGTGGATGAAAAGTGTTGATCGAGCTAAAAGCCAAGTGAGCAGCCTCACAGAGTATAATAACAATGGATGTTCCTTCAACTTTGTTTGTTCACGAATAAAATTCGGAGTAGTAGTAGAAGAGAAAACCAGTGAGGTTAAAGAGCTTCTTGACAATGGTCAGTTCTTGGATGATTTAGTGGCTGAAAAGTTGCCTAAGGTAGGGTACACTCTTCCTTCGTCGCCATTAATGGAGTGTGACACAACGATGAAGAGTTTAACGAGGATACTGGAATGCTTATCACAAGAGAGTGTGAAAAGGATTGGAGTTTATGGGATGGGAGGAGTAGGCAAAACAACTATCACGAAAGAAATCCACAATCGTCTTTTAGAAGGGAGAGATTTTGATCATGTCATATGGGTTTCTGCACCAAAAGAGACAAGTCCTGTGAAACTACAAAAGGGCATTGGAGAGAAGCTGGATTTAGATCTTTCAATGATCGACGATGATGTTACAAGAGCAGCCAAGTTATTTGAGGCTTTAAGCAGAAGAAAGAGATACACATTGATTCTGGATGATTTGTGGGAGCAGTTCTCTCTTGAAACAGTTGGAATACCGATACCAACAACAGAGAACGCTTGTAAGTTGGTGATCACTACGCGATTGCTGAGTGTTTGTCGAGGTATGGAGACGGATAAGGATGTAGAAGTGAAGGCCCTTAAAGATGATGAGGCATGGGATCTCTTTAGGTCTAAAATTGGACCAATAGTGTCAAATTCTGCAGAAGTAGGGATGATTGCAAAGGAAGTAACAAAAGAATGTGGAGGTTTGCCTCTTGCTATTGTTACAGTAGGACGCGCCTTGAGAAATGCCGCTGACGTATCAGAGTGGGAGTGTGCGTTAGATGAGCTAAGAGCTTCAACAGCAAATATTGAAAGGATGGAAGAAGCAGTGTTTGCACACTTGAGATTTAGCTATGCCAAGCTAAAGGATGATACAAGCAGGTCTTGTTTCCTCTTTTGTGCTTTATACCCTGAAAGTCACCAAATTGATACCAATGAGCTGATGGAATATTGGATGTGGGAAGGTTTATTAGGTTATGTTGGAGGAATAGCTGCAATGAAGAGGAAAGGGAAAATCATATTGAATGAATTAAAACATGCATGTTTATTAGAGAGTCTCACTCAAAACACCGTGGAATTCATCAGAATGCATGATTTAATACGAGATATGGCCATTAAAATCGTGAGAACAAATCCTCACTTCATATGTAAAGCAGGGATAGGGATGACAAAACATCAATGGATGGAGGAATGGGCAGAAGATGTTCAAAGGGTGTCATTAATGAGAAATGACTTGAAATGTATTCCCTTCAACTACAACCTCATGTGGCCTAAACTTACTTCCTTATTGTTGCAATTCAACTCGTTTTCTGAAAATATATCCCATGAATTCTTTGAAAGCATGCAATTTCTAAAAGTTCTGGACCTTTCCTACACTGGGATTGATTTCTTGCCCAACTCTGTCTCTAATTTAGAGAATCTATCTGCTCTGATATTGAGCAACTGTTGGAATTTATCAGCAGTTCCTTCTTTGGCAAAACTGAATAAGCTGATGGTCCTTGATCTCTCTTGCTCTCCAAGAATGAAAGAACTTCCAGATGGGATGCAATGGTTGGGAAACTTAAGGCGCTTAAATATTTCCAAGACTGGAATTGAAATCTTCCCATTTGGATTATTGTCCAAGTATACCCTTTTGGAAGACTTACTGATAGGTGGTTGTGGTATCTTGTGGGGATCAATGACAGTCAAAGCCATTAGTGGTGGAGCTTTCATTGAAGAAGTCATTTCCTCAAATATATCTTCTCTTGAACTAGACTTATGGAATGCAAATGTGTTTGATCAATATGCCAAATCTGGTCACTGGATTCAACTGGATAAGTTCAGGATAACAATTGGGCAGCCCCAAGCACAGTTTTGTGAAGAGAGAAGCTTAGCCTTTAGTGGAAGACTTATTCTAAGAGGAAACCCAATTTCTCTACCACCAAACACATTGGAGCTACATCTGGATGACTCTGCTGATATTAAGAATCTAAGTATGTGCTTAGTGAATGTGACACAATTGAAATACTGTATAATCAAGTGGTGTGATGACATAGAAAGCATAATTGACTCAGAGGAAGAGGAAAACACTTTACCCATGCTAGAAAGGATGGAACTTTTAGTTCTGGGAAACTTGAAGATGATATGTAGGGATGTGGTGAGACCTGACACTCTTATGAGCTTGAAGATCATTACTGTGGAATATTGTCCAAAATTGAAGGCTCTATTCTCAGGGCAAATTTTGCTTCAACTTAATAATCTGGAAGAAATTAGTGTTCGCAGTTGTACTGGTATGAAGTGCTTAATGAAAGAAGAAGAGGGAGAAAATGATTCAGGAAGTGAAGAAGAGGAAGAAAGTGATTCAAGAATTGAGTTTCCTAAGTTGAAGAGGATGAAACTGAAGTCCATGCCCCTTCTGAAGCGTATATATGATGGAATCATTCTCTGCCCTTCTTTAAAAAGTCTTGAGGTAGCATCTTGTGAAGCTCTGAAGAAGCTTCGTCTTGATCTGTCAGCAACACCTGCTCTTGAAGAAATCAGAGCAACCAGAACATGGTGGAACTCATTAGAGTGGGATCAACTTGATTTCAAAGATGTCATGCAACCTTACCTTTTGGAAACTAGATTTACAAGTGACAGATGA 2946 0.3982 MDVGSIVSILSCLCSQNSLRQSLERRFRHLRKPRKNLNKLKELVEQLDARKSDINTKLDQMWLEKGMNPREEVKLWMKSVDRAKSQVSSLTEYNNNGCSFNFVCSRIKFGVVVEEKTSEVKELLDNGQFLDDLVAEKLPKVGYTLPSSPLMECDTTMKSLTRILECLSQESVKRIGVYGMGGVGKTTITKEIHNRLLEGRDFDHVIWVSAPKETSPVKLQKGIGEKLDLDLSMIDDDVTRAAKLFEALSRRKRYTLILDDLWEQFSLETVGIPIPTTENACKLVITTRLLSVCRGMETDKDVEVKALKDDEAWDLFRSKIGPIVSNSAEVGMIAKEVTKECGGLPLAIVTVGRALRNAADVSEWECALDELRASTANIERMEEAVFAHLRFSYAKLKDDTSRSCFLFCALYPESHQIDTNELMEYWMWEGLLGYVGGIAAMKRKGKIILNELKHACLLESLTQNTVEFIRMHDLIRDMAIKIVRTNPHFICKAGIGMTKHQWMEEWAEDVQRVSLMRNDLKCIPFNYNLMWPKLTSLLLQFNSFSENISHEFFESMQFLKVLDLSYTGIDFLPNSVSNLENLSALILSNCWNLSAVPSLAKLNKLMVLDLSCSPRMKELPDGMQWLGNLRRLNISKTGIEIFPFGLLSKYTLLEDLLIGGCGILWGSMTVKAISGGAFIEEVISSNISSLELDLWNANVFDQYAKSGHWIQLDKFRITIGQPQAQFCEERSLAFSGRLILRGNPISLPPNTLELHLDDSADIKNLSMCLVNVTQLKYCIIKWCDDIESIIDSEEEENTLPMLERMELLVLGNLKMICRDVVRPDTLMSLKIITVEYCPKLKALFSGQILLQLNNLEEISVRSCTGMKCLMKEEEGENDSGSEEEEESDSRIEFPKLKRMKLKSMPLLKRIYDGIILCPSLKSLEVASCEALKKLRLDLSATPALEEIRATRTWWNSLEWDQLDFKDVMQPYLLETRFTSDR 981
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2253 981 Gene3D - 306 392 IPR042197 -
Acco06g2253 981 SMART AAA_5 171 308 IPR003593 GO:0016887
Acco06g2253 981 Coils Coil 37 57 - -
Acco06g2253 981 FunFam Probable disease resistance protein At5g66910 306 392 - -
Acco06g2253 981 FunFam Probable disease resistance protein At1g61300 140 301 - -
Acco06g2253 981 Pfam NB-ARC domain 159 394 IPR002182 GO:0043531
Acco06g2253 981 Gene3D - 140 304 IPR027417 -
Acco06g2253 981 SUPERFAMILY L domain-like 470 935 - -
Acco06g2253 981 Pfam Leucine rich repeat 532 590 IPR001611 GO:0005515
Acco06g2253 981 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 139 408 IPR027417 -
Acco06g2253 981 Gene3D Ribonuclease Inhibitor 825 958 IPR032675 -
Acco06g2253 981 Gene3D Ribonuclease Inhibitor 491 714 IPR032675 -
Acco06g2253 981 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 28 934 - -
Acco06g2253 981 FunFam Probable disease resistance protein At1g63360 393 481 - -
Acco06g2253 981 Gene3D - 393 481 IPR036388 -
Acco06g2253 981 PRINTS Disease resistance protein signature 577 593 - -
Acco06g2253 981 PRINTS Disease resistance protein signature 174 189 - -
Acco06g2253 981 PRINTS Disease resistance protein signature 248 262 - -
Acco06g2253 981 PRINTS Disease resistance protein signature 341 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2253 Acco-ChrAcco06 17841722 17844667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2253 172 483 WRKY Transcription Factor Family AT5G45050 23.511 1.68e-10 63.5