Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2231 ATGGATATTCTACTAAAAATGAAAATTTTCTGCAGATTGGCTCTTGTTCTTGTGCTATTATTATATGCGAAGCCTGTTGTATCATCTTCGAGACACAGGCAATATTATAGGAAGCTGAGTTCTACGGATAGTAATAATGAAGATCTTGTCACCAACTTACCTGGTCAGCCTCATGCAGATTTCAAGCACTTTGCGGGCTATGTCGCAGTGAATGAAACTAAAGGAAGAGCACTCTTTTACTGGTTTTATGAGGCCATCACCAATCCTCAAGATAAACCCTTAGTGCTTTGGCTCAATGGAGGACCTGGGTGCTCTTCAGTGGGATATGGAGCAACACAGGAGATTGGTCCTTTTTTAGTGCACAGTAATGGCCAGGGTCTTAAATATAATAACTTCTCATGGAACAGAGAAGCCAATGTTTTGTTCGTGGAATCTCCTATTGGGGTTGGCTTTTCCTACTCAAACACAACCAGTGATTATGAACATATTGGAGATGACTTCACAGCTACCGATGCTTACAATTTCCTGCACAAGTGGTTCCTCAAGTTTCCATCTTACAGAAATAGGACATTTTACATAGCAGGAGAGAGTTATGCAGGGAAGTATGTACCTGAGCTTGCTGAGCTCATCGTTGATAGTAACAAGGACCCTTCACTTCATATTGATCTTAAGGGTATCCTGCTGGGAAATCCAGAAACATCTGATGCTGAGGACTGGAGAGGAATTGTGGATTATGCGTGGAGCCACGCAGTGATATCAGATGAAACATACGTAACAATAAGAGAAAGCTGTGACTTCAAAAGCAGTGATCCATGGAAGAACCAAACTTGTTGTGATTCTGTGGATGAAGTGTTCTCTCAGTACGGAAAGATTGATATCTATAGCATCTATACCTCTGTCTGCTTTGCCTCTACTGCTCGCTCCAATATTGATCAATCTCAATCTCTACAAGGCCGACGCGTCATGAAATATAAACGTTCTTCCAAAATGATGCCGAGGATTATGGGTGGTTATGATCCATGTTTGGATGATTATGCGAGAGCTTTCTATAACAGACCAGATGTTCAGAAGGCTCTTCATGCCAGTGATGGTCATAGTCTTAAGAATTGGAGTATTTGCAACGATAAGATGTTCAACGATTGGGGAGATTCAAAGCCATCCATGATCCCAATTTACAGGAAGCTTATTTCGGCAGGACTTAGAATCTGGGTTTACAGTGGAGACACAGATGGGAGAGTGCCAGTACTGTCCACAAGATACAGCTTAAGCAATCTGAATTTGCGAATCACCAAGCCATGGAGACCATGGTATCACGAGAACGAGGTAAGCGGGTGGGTTCAAGAGTACGAGGGGCTGACTTTTGCGACGTTTAGAGGAGCAGGACATGCAGTGCCTTGCTTCAAACCAAGCAATTCACTCGCACTCTTCTCTTCTTTTCTTCTCGGACAATCACCTCCTTCTACTAATAAATAA 1473 0.4257 MDILLKMKIFCRLALVLVLLLYAKPVVSSSRHRQYYRKLSSTDSNNEDLVTNLPGQPHADFKHFAGYVAVNETKGRALFYWFYEAITNPQDKPLVLWLNGGPGCSSVGYGATQEIGPFLVHSNGQGLKYNNFSWNREANVLFVESPIGVGFSYSNTTSDYEHIGDDFTATDAYNFLHKWFLKFPSYRNRTFYIAGESYAGKYVPELAELIVDSNKDPSLHIDLKGILLGNPETSDAEDWRGIVDYAWSHAVISDETYVTIRESCDFKSSDPWKNQTCCDSVDEVFSQYGKIDIYSIYTSVCFASTARSNIDQSQSLQGRRVMKYKRSSKMMPRIMGGYDPCLDDYARAFYNRPDVQKALHASDGHSLKNWSICNDKMFNDWGDSKPSMIPIYRKLISAGLRIWVYSGDTDGRVPVLSTRYSLSNLNLRITKPWRPWYHENEVSGWVQEYEGLTFATFRGAGHAVPCFKPSNSLALFSSFLLGQSPPSTNK 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2231 490 Gene3D - 341 377 - -
Acco06g2231 490 ProSitePatterns Serine carboxypeptidases, serine active site. 193 200 IPR018202 GO:0004185
Acco06g2231 490 Gene3D alpha/beta hydrolase 44 303 IPR029058 -
Acco06g2231 490 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 469 IPR001563 GO:0004185|GO:0006508
Acco06g2231 490 FunFam Carboxypeptidase 44 303 - -
Acco06g2231 490 Gene3D - 388 482 - -
Acco06g2231 490 FunFam Carboxypeptidase 388 482 - -
Acco06g2231 490 Pfam Serine carboxypeptidase 57 481 IPR001563 GO:0004185|GO:0006508
Acco06g2231 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 179 204 IPR001563 GO:0004185|GO:0006508
Acco06g2231 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 452 465 IPR001563 GO:0004185|GO:0006508
Acco06g2231 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 130 142 IPR001563 GO:0004185|GO:0006508
Acco06g2231 490 PRINTS Carboxypeptidase C serine protease (S10) family signature 143 153 IPR001563 GO:0004185|GO:0006508
Acco06g2231 490 SUPERFAMILY alpha/beta-Hydrolases 45 484 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2231 Acco-ChrAcco06 17577544 17581134 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2231 346 483 Calmodulin-binding Proteins AT2G22960 34.532 3.60e-17 77.8