Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2227 ATGGTTATGGATAGTACTGATTCGTGTTCAGGGTATCAGCTTCCTCCTGGATTCCGATTTCATCCCACCGACGAAGAGCTCGTCGTTCACTACTTGAAGCGAAAAACCGCCTCTGCTCCGCTTCCTGTGGCCATTATTGCCGACGTCGATCTCTATAAGTTCGATCCCTGGGAGCTTCCAAGTAAGGCAGCGTTTGGGGAGAAAGAGTGGTACTTCTTCAGCCCCAGAGATCGCAAGTATCCAAATGGAGCTAGGCCAAACAGGGCAGCCACTTCGGGATATTGGAAAGCCACCGGAACTGACAAGCCGATAATGTCGTCGGACGGCCGAAACCAGAAAGTCGGGGTGAAGAAAGCCCTGGTTTTCTACGGCGGAAAACCTCCAAAAGGCGTTAAAACCAACTGGATCATGCATGAATATAGACTCACTGACAACAATTCTTACAACAACAATAATAATTCCATCCCTAAGCCTCCTCCTCCGGCTTCCGATCCAGCCTCACAATCTACCAAGAAAAACTCCTTAAGGCTTGATAACTGGGTTTTGTGTCGAATATACAAGAAAAGCAATAGTAATATGAATACTGGTTTACAAAGGCCGCAATTAATGGAGCAGGAGAGGGAGATTTGTATGGAGGCTATGATTCCCACAATCTCAAGTTTATCAATGGCTAATGGACTTGAGAATAATGATGACAGCTTGTTCAACGGAATTCTGGGAATAGGCAGCGGCGTAGGAGGCGGCTGTGGTGGTGGTGAAGAATCTCATGATCATTATCATCATCACTTGCTGTCGTCAAACCCATCCAAAGCAGTGAAAAGACCCCTGGCAGCATCGGCGTTTTGGAACGAGACGGCGGGGTCACCGTCGGGATCATCTTCGTCAAGCAAGAGATTCCACGGTGATCTGAACAGTAGTGGGATGAGTGCTTCCTCGGCCGATGAGAACAGCTCGTTCATTTCTCTGCTAAGCCAGCTTCCTCCTCACCATCAGAATACGACGACGTTTCTTGGCTCCGTCGGTGATGGCGTTTTGAGGCAGCAATTTCAGCTTCCAAGCATGAATTGGACCTCATAA 1077 0.4828 MVMDSTDSCSGYQLPPGFRFHPTDEELVVHYLKRKTASAPLPVAIIADVDLYKFDPWELPSKAAFGEKEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPIMSSDGRNQKVGVKKALVFYGGKPPKGVKTNWIMHEYRLTDNNSYNNNNNSIPKPPPPASDPASQSTKKNSLRLDNWVLCRIYKKSNSNMNTGLQRPQLMEQEREICMEAMIPTISSLSMANGLENNDDSLFNGILGIGSGVGGGCGGGEESHDHYHHHLLSSNPSKAVKRPLAASAFWNETAGSPSGSSSSSKRFHGDLNSSGMSASSADENSSFISLLSQLPPHHQNTTTFLGSVGDGVLRQQFQLPSMNWTS 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2227 358 ProSiteProfiles NAC domain profile. 14 188 IPR003441 GO:0003677|GO:0006355
Acco06g2227 358 PANTHER NAC TRANSCRIPTION FACTOR 56 13 229 - -
Acco06g2227 358 FunFam NAC transcription factor 56 23 193 - -
Acco06g2227 358 SUPERFAMILY NAC domain 8 188 IPR036093 GO:0003677|GO:0006355
Acco06g2227 358 Gene3D NAC domain 23 193 IPR036093 GO:0003677|GO:0006355
Acco06g2227 358 Pfam No apical meristem (NAM) protein 15 142 IPR003441 GO:0003677|GO:0006355
Acco06g2227 358 MobiDBLite consensus disorder prediction 147 172 - -
Acco06g2227 358 MobiDBLite consensus disorder prediction 285 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2227 Acco-ChrAcco06 17468561 17469995 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2227 13 358 NAC Transcription Factor Family AT1G61110 52.066 6.41e-104 307
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g2227 NAM 4.4e-40 No_clan