Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2149 ATGGACAACAACAACATTCTAGCTTCTTCATCCGCAGGAGGCGACAGAAAAGTGATAGAGAGAAACCGAAGAAGCCAAATGAGGGCTCTATGCTCCCAGCTCAGCACACTCGTCCCTCGTCAATCCTCATCACCCGTGATTTCGCTGTCAGATCAGCTGGGTGAAGCAGCCACCTACATCAAGAAGCTTCAGATAAAATTGGAGACGATGAATCAGAAGAAGCTCAGCCTAATTGGAACGCCCAGCAACGAGCCAAACATTATGAGTGAGAGTCCAATTAGTAATAACAATAATAGAAGGATCGTTATGGGGTCTAAAGCACCCCAAGTTGAGATTTACCAAATGGGATCAACTTTAGCGGTTTCTGTAATTACTGGCTTGGATTGCCACTTCATTTTCGGCGACTTCGTCCGCATCCTTCATGATGAACAGGCCGATATTGTTAATGCCAGTTACTCAGTCGTTCAAGATACTGTTTTTCATAACATTCACTGTCAGGTAGGAGAATGTGGAGATAGAGCTGGGAGGATATCAGAAAGATTAAAGAGGTTTGTGTATGGTTCTGGTGCTTTTTGA 576 0.4427 MDNNNILASSSAGGDRKVIERNRRSQMRALCSQLSTLVPRQSSSPVISLSDQLGEAATYIKKLQIKLETMNQKKLSLIGTPSNEPNIMSESPISNNNNRRIVMGSKAPQVEIYQMGSTLAVSVITGLDCHFIFGDFVRILHDEQADIVNASYSVVQDTVFHNIHCQVGECGDRAGRISERLKRFVYGSGAF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2149 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 11 63 IPR011598 GO:0046983
Acco06g2149 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 17 77 IPR036638 GO:0046983
Acco06g2149 191 Gene3D - 14 84 IPR036638 GO:0046983
Acco06g2149 191 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 14 186 - -
Acco06g2149 191 Pfam Helix-loop-helix DNA-binding domain 17 64 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2149 Acco-ChrAcco06 16401473 16402492 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2149 11 185 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 39.888 3.86e-37 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco06g2149 HLH 4e-07 No_clan