Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2148 ATGGAAAACATTCCAGGTACTTCGTTCAGAGGCGATAGGAAAATGATAGAGAGGAACCGAAGAAGCCATATGAGGGCTCTTTGCTCTCAGCTTAGCTCACTCGTCCCTCATCAAACCTCCAAGGAGATGATTTCGCTGCCGGATCAGCTGGGTGAAGCCACGAACCACATAAAGAAGCTTCAGATAAAGTTGGAGAAGATGAGGAATAAGAAACTCAGCTTAATGGGAATCAACAATAACGAGCCAAACATTAGTGGGAGGCAAAGTAGCAGTAGTAATAATAATAATAATAGAGGAATGGTTATGGGGTCGAAATCGCCCAAAGTTGAGATTCACCATGTGGGTTCAACTTTGATTGTTTCAGTGATTACTGGGTTGGATTGCCAGTTCATCTTCAACGAGTTCATTCGCATTCTTCACCAAGAACAAGCTGAAGTTGTTAACGCTAGTTATTCAGTCGTTCAAGATGCTGTTTTTCATACCATTCACTGTCAGATAGGAGAATGTGGTGAGAGAGGTGGGAGGATATTGGAGAGATTAAAGGGGTTTATCTATGGTTCTGGTGCATTTGATGAAGACACTGGTAATGGCCTCACTCAACTGGAGTTGTGA 612 0.4281 MENIPGTSFRGDRKMIERNRRSHMRALCSQLSSLVPHQTSKEMISLPDQLGEATNHIKKLQIKLEKMRNKKLSLMGINNNEPNISGRQSSSSNNNNNRGMVMGSKSPKVEIHHVGSTLIVSVITGLDCQFIFNEFIRILHQEQAEVVNASYSVVQDAVFHTIHCQIGECGERGGRILERLKGFIYGSGAFDEDTGNGLTQLEL 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2148 203 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 9 73 IPR036638 GO:0046983
Acco06g2148 203 Pfam Helix-loop-helix DNA-binding domain 12 61 IPR011598 GO:0046983
Acco06g2148 203 MobiDBLite consensus disorder prediction 77 101 - -
Acco06g2148 203 Gene3D - 8 85 IPR036638 GO:0046983
Acco06g2148 203 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 8 60 IPR011598 GO:0046983
Acco06g2148 203 SMART finulus 14 66 IPR011598 GO:0046983
Acco06g2148 203 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 11 181 - -
Acco06g2148 203 Coils Coil 50 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2148 Acco-ChrAcco06 16392523 16393394 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2148 6 184 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.308 6.57e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco06g2148 HLH 3.5e-07 No_clan