Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2147 ATGATGGAGAACGTTCCAGCTCCTTCGCCTAGAGGCGATAGGAAAGTAATAGAGAGGAACCGAAGAAGGCAAATGAGGGCTCTTTACTCCAACCTCAACTCCCTTGTCCCTCATCAATCCTCAAGGGAAGTGATTTCTGTGACGGATCAGCTGGGTGAAGCTACTAATTACATAAAGAAGCTTCAGATAAGGTTGGAGAAGATGAAAGAGAAGAAACTCGACCTTATGGGAACCGACAGTAGTACTAAGAGAAATAATTCTAACTATGGGTGCTTAATCAACAATAATAGAGGAATCATCATGAACGGGTTAAAATCGCCTAGAGTTGAGATTCACCAAATGGGTTCAGCATTAAGCGTTTCATTGATTACTGGCTTGGACTGCCACTTCATTTTCAACGAGTTCATTCGCATTCTTCACCAAGAACAAGCTGACATCGTTAACGCCAGTTACTCAGTCCTTCAAGATACTGTTTTTCACACCATTCACTGTCAGATAGGAGAATGTGGTAACAGAGCTGAGAGGATATCGGAGAGATTAAATAGATTTGCGTCTGGTTCTGGTGGTGCTTGTTGA 576 0.4253 MMENVPAPSPRGDRKVIERNRRRQMRALYSNLNSLVPHQSSREVISVTDQLGEATNYIKKLQIRLEKMKEKKLDLMGTDSSTKRNNSNYGCLINNNRGIIMNGLKSPRVEIHQMGSALSVSLITGLDCHFIFNEFIRILHQEQADIVNASYSVLQDTVFHTIHCQIGECGNRAERISERLNRFASGSGGAC 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2147 191 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 14 75 IPR036638 GO:0046983
Acco06g2147 191 Pfam Helix-loop-helix DNA-binding domain 13 62 IPR011598 GO:0046983
Acco06g2147 191 Gene3D - 7 89 IPR036638 GO:0046983
Acco06g2147 191 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 9 61 IPR011598 GO:0046983
Acco06g2147 191 PANTHER ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED 12 182 - -
Acco06g2147 191 SMART finulus 15 67 IPR011598 GO:0046983
Acco06g2147 191 Coils Coil 51 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2147 Acco-ChrAcco06 16384941 16385855 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2147 13 186 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G20970 42.373 4.23e-42 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Acco06g2147 HLH 8.7e-08 No_clan