Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2135 ATGGCTGCATCTTCTGCAGCTCTCAATTCCCTCTCTTCTTTGTCCCTTCCCTCTTCTTGCCGCTTCTCTCTCTTCCCCACCGCCAAATTCACCTTCTCTCTCGTCCCCAAGACCCCACAACCATTTCTCTCTACTTCCTCATCCTCCATTATCCCCAAACCCAAATCCACGTCCTCCGATGACATTGATACCTCCTTCTTCGACGATGTAAGGCCAGAAGAAGACGTTGCCTTCGAGCCCCCGGAACCTCCCGAAGGCTTCGTTCCCCCTCCTCCCGTCGACGATGGTCCGATGGAGGCAGAAGAGGAAATCGCCGCCGCTTATGAGGAGCTTTACGGACCTGCATTCAGCGGTGTTTCTGTTCTGGGCAACGATGTGTACGTAATGGACTCCAAATTGAAAAAAGATACTGGGTTGCGCTCAAAGGGGAAGAGAACTAAGGTTAAGGATGGATTGGAAGAAAGGGTTGTACAGGTCAGAAGGGTGAACAAGGTTGTAAAAGGAGGGAGGCAGTTGAATTTCAGGATAGTTATGGTTGTGGGTGACAAGAAAGGCCAAGTGGGTGTAGGAGTTGGGAAAGCAATGGACGTTTCGGAAGCAGTTCAGAAATCTGCTGTAAATGCAAGGCGGAATATCATCACAGTGCCTATGACTAAGTACCTGACTTTCCCACATAGATCTGAGGGAGATTATGGAGCAGCAAAGGTGATGCTTAGACCTGCTGCACCTGGTACTGGAGTTATCGCAGGTGGCTCTGTGAGAATTGTTCTAGAAATGGCAGGCGTTGAGAATGCTTTGGGAAAGCAATTAGGGAGCGATAATGCCCTCAACAATGCCAGAGCAACAGTTGTCGCTGTGCAGAAAATGAGGCATTTCCGCGATGTCGCTGCAGAGCGAGGTATCCCAATGGAAGAACTATGGAAGTAA 927 0.4973 MAASSAALNSLSSLSLPSSCRFSLFPTAKFTFSLVPKTPQPFLSTSSSSIIPKPKSTSSDDIDTSFFDDVRPEEDVAFEPPEPPEGFVPPPPVDDGPMEAEEEIAAAYEELYGPAFSGVSVLGNDVYVMDSKLKKDTGLRSKGKRTKVKDGLEERVVQVRRVNKVVKGGRQLNFRIVMVVGDKKGQVGVGVGKAMDVSEAVQKSAVNARRNIITVPMTKYLTFPHRSEGDYGAAKVMLRPAAPGTGVIAGGSVRIVLEMAGVENALGKQLGSDNALNNARATVVAVQKMRHFRDVAAERGIPMEELWK 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2135 308 MobiDBLite consensus disorder prediction 38 65 - -
Acco06g2135 308 SUPERFAMILY dsRNA-binding domain-like 149 217 - -
Acco06g2135 308 Gene3D - 143 213 - -
Acco06g2135 308 ProSitePatterns Ribosomal protein S5 signature. 169 201 IPR018192 -
Acco06g2135 308 ProSiteProfiles S5 double stranded RNA-binding domain profile. 152 215 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Acco06g2135 308 FunFam 30S ribosomal protein S5 217 308 - -
Acco06g2135 308 Pfam Ribosomal protein S5, C-terminal domain 229 299 IPR005324 GO:0003735|GO:0005840|GO:0006412
Acco06g2135 308 MobiDBLite consensus disorder prediction 38 61 - -
Acco06g2135 308 PANTHER RIBOSOMAL S SUBUNIT 139 307 IPR000851 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Acco06g2135 308 SUPERFAMILY Ribosomal protein S5 domain 2-like 222 300 IPR020568 -
Acco06g2135 308 Pfam Ribosomal protein S5, N-terminal domain 152 216 IPR013810 GO:0003723|GO:0003735|GO:0005840|GO:0006412
Acco06g2135 308 Gene3D - 219 307 IPR014721 -
Acco06g2135 308 Hamap 30S ribosomal protein S5 [rpsE]. 129 305 IPR005712 GO:0003735|GO:0006412|GO:0015935
Acco06g2135 308 NCBIfam 30S ribosomal protein S5 150 305 IPR005712 GO:0003735|GO:0006412|GO:0015935
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2135 152 292 Cytoplasmic Ribosomal Protein Gene Family AT3G57490 28.188 2.46e-13 67.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2135 06 16198018 16200040 Acco06g2135 06 16198018 16200040 ECH