Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2134 ATGAACAACAGCAAGCCTCAGGCTCAGCCACAGCAACCCCAGAAATGTCCTCGGTGTGATTCTCTCAACACCAAGTTCTGTTACTATAACAACTATAGCCTCTCCCAGCCTCGTTACTTTTGCAAGGCCTGTCGACGGTACTGGACCCAAGGCGGAACCTTGAGGAACGTCCGCGTCGGCGGTGGCTGCCGGAAGCCCAAGCGAACCAAAGGAAGTTCTTCCTCTTCCGCCGACGCTACTTCCGCCCCGTCGCGAGAGGCAGAGGTTCAGAACGACCCTTCCGCCGCGAGTTCTGCTTCTACTACTGCTACTTTGGCGGTCCCATCAATCAGCCCCTTTTATCAAGGCGGAGCATGTGCTAGTGGTAGTGGTGGCCGGTATTTGTCGTCCCTGGCGGCGATTCAATCCCTGAATCCATCACAGCCGTTCAATCAGATGAGTCTTCTTTCTGGGTTCGGTGGTGTTGATATTCCTTTGGGCTCATCATCAATACGGCCGCCGCAGCCGTTTTATCAGATGAGTAGTATCAGAGAAAAGGAAGAAGAGACGACTGATCTGTATGAAGCAGACCAAGTTCTGATTCAGTCAACCACGGCGAATAGTGGTTCTGCTTCGACTCATCACCATGATGTTTGGACTGAAAGCTTCATCAACAACGTTAATAACCAGAGAGGATCCGATGCCTCTCTGTGGAGCACCACCATGAGTATCGTTTCTACAAGTGGAAATTCTCAGAGTCATAATACTGATACTGTTGGTGGGTCATTTTCTTTGATCCCGAATCACCAGTGGCCTGATCTTCCTGACTATGACCCTCCTCCATGA 825 0.5103 MNNSKPQAQPQQPQKCPRCDSLNTKFCYYNNYSLSQPRYFCKACRRYWTQGGTLRNVRVGGGCRKPKRTKGSSSSSADATSAPSREAEVQNDPSAASSASTTATLAVPSISPFYQGGACASGSGGRYLSSLAAIQSLNPSQPFNQMSLLSGFGGVDIPLGSSSIRPPQPFYQMSSIREKEEETTDLYEADQVLIQSTTANSGSASTHHHDVWTESFINNVNNQRGSDASLWSTTMSIVSTSGNSQSHNTDTVGGSFSLIPNHQWPDLPDYDPPP 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2134 274 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 7 214 IPR045174 GO:0003700|GO:0006355
Acco06g2134 274 MobiDBLite consensus disorder prediction 68 97 - -
Acco06g2134 274 MobiDBLite consensus disorder prediction 61 97 - -
Acco06g2134 274 ProSitePatterns Zinc finger Dof-type signature. 16 52 IPR003851 GO:0003677|GO:0006355
Acco06g2134 274 ProSiteProfiles Zinc finger Dof-type profile. 14 68 IPR003851 GO:0003677|GO:0006355
Acco06g2134 274 MobiDBLite consensus disorder prediction 240 258 - -
Acco06g2134 274 MobiDBLite consensus disorder prediction 240 274 - -
Acco06g2134 274 Pfam Dof domain, zinc finger 12 68 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2134 Acco-ChrAcco06 16162055 16162879 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2134 16 153 C2C2-Dof Transcription Factor Family AT4G21050 47.619 2.30e-34 122
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco06g2134 zf-Dof 2.2e-31 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2134 06 16162055 16162879 Acco06g2134 06 16162055 16162879 CCT
Acco06g2134 06 16162055 16162879 Acco06g2134 06 16162055 16162879 ECH