Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2133 ATGTTGGGTACCTGTGAGAAAATGGTGGTCATGCCCCCAACAACGGATAACGAATGGCCACAGATTGTTGATCATCATCAGAAGATCTCATCCTCGTCGATGGGTTCCGGTGGGAGGACGGCGACAATGGAGAAACCTTCCGGTCAGGAGCAACAATCTCTCAAGTGTCCTCGTTGTGAATCAACCAACACTAAGTTCTGCTACTACAACAACTATAGCTTGTCTCAGCCAAGACACTTCTGCAAATCCTGCAAGCGATATTGGACCAGAGGAGGTACTCTGAGAAATGTTCCTGCGGGAGGTGGATGCCGGAAGAACAAGCGCGTGAAGCGTCAAACGCCTTCTTCTGCTTCTGATCACACTACTGCTCCTTCTTCTTCTTCATCTTCTCCTAGTGCTGCTAATAATTCAAACCTTCCTTCTCATCAACCTCACATCGATACTCATCATGTCGCTCCTCTGTTTTATGGGTTACCACCTGGTAACTCTGTTAATTCTGATATGAATCTTGCGTTCCCAAGGTTCAATAATTCTGGATCGTACGATCATCTGAATTCCCTGGGATTAGCTAGTTTTTCATCTGGGTATACCTCAAACGATTCACTTTTCTTGAATTACAATTCCATCTTTGGTGGTTCTTCTTCAACTACCGTATCTTCCCTGTTATACCCTAGTAGTACTAATCCGCAGCAACAGAAGTTCATCAATGGAGGCTTGAAGGATGACGTTTTAGGCACTAATAACACTTTCCGGGGCCTGTTAGACCCATTGGAAGATCAGGTGAAAGTGGAAGAAGAAAGACCAAACCAGATCATGGAACATGGGAGCTTGTTCGATTTCTATTCACCTTATTATTGGAATGATCAAACTAATAATTTTGGTCCTTCAGTCACTTCCATGATCGAGTAA 909 0.4411 MLGTCEKMVVMPPTTDNEWPQIVDHHQKISSSSMGSGGRTATMEKPSGQEQQSLKCPRCESTNTKFCYYNNYSLSQPRHFCKSCKRYWTRGGTLRNVPAGGGCRKNKRVKRQTPSSASDHTTAPSSSSSSPSAANNSNLPSHQPHIDTHHVAPLFYGLPPGNSVNSDMNLAFPRFNNSGSYDHLNSLGLASFSSGYTSNDSLFLNYNSIFGGSSSTTVSSLLYPSSTNPQQQKFINGGLKDDVLGTNNTFRGLLDPLEDQVKVEEERPNQIMEHGSLFDFYSPYYWNDQTNNFGPSVTSMIE 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2133 302 MobiDBLite consensus disorder prediction 29 55 - -
Acco06g2133 302 Pfam Dof domain, zinc finger 52 108 IPR003851 GO:0003677|GO:0006355
Acco06g2133 302 MobiDBLite consensus disorder prediction 115 144 - -
Acco06g2133 302 MobiDBLite consensus disorder prediction 95 146 - -
Acco06g2133 302 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 40 213 IPR045174 GO:0003700|GO:0006355
Acco06g2133 302 ProSitePatterns Zinc finger Dof-type signature. 56 92 IPR003851 GO:0003677|GO:0006355
Acco06g2133 302 ProSiteProfiles Zinc finger Dof-type profile. 54 108 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2133 Acco-ChrAcco06 16147248 16148336 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2133 54 158 C2C2-Dof Transcription Factor Family AT1G28310 62.857 2.28e-35 128
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Acco06g2133 zf-Dof 8.6e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2133 06 16147248 16148336 Acco06g2133 06 16147248 16148336 CCT
Acco06g2133 06 16147248 16148336 Acco06g2133 06 16147248 16148336 ECH