Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2131 ATGGAAAGAAGCGGAGAGGGAAAGAGGAGCTTCAAGTACAAGGTGGAGGAGGAGGAGGAAGAGGTAGAAGATGAAGAAGAAGAAGAAGAAGAAAATGAAGTTGATGAGTTCAATTTAAGAGAAGAAGAAGATGGGAGGAACAAGAAGATGAGAGATCTGTACAACAACAGCAAGAGATGGTCTTCTTCATCATCGTCGTCAATGGCACCTTCATGTCAGGTGGAAAGCTGTGAGAGTGATCTGAGTGAGGCTAAGCACTACCATCGCCGCCATAAGGTCTGCGAGTTCCATGCCAAGGCTGCTTCTGTGCTCATTTCTGGCTTGCAACAAAGGTTTTGCCAACAATGCAGCAGGTTTCATGAGCTGGGAGAATTTGATGACGCCAAGAGAAGCTGCAGGAAGCGTTTGGCTGGACACAATGAAAGGCGTCGAAAGAATGCATCTTAA 447 0.4631 MERSGEGKRSFKYKVEEEEEEVEDEEEEEEENEVDEFNLREEEDGRNKKMRDLYNNSKRWSSSSSSSMAPSCQVESCESDLSEAKHYHRRHKVCEFHAKAASVLISGLQQRFCQQCSRFHELGEFDDAKRSCRKRLAGHNERRRKNAS 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2131 148 Coils Coil 8 35 - -
Acco06g2131 148 MobiDBLite consensus disorder prediction 17 38 - -
Acco06g2131 148 ProSiteProfiles Zinc finger SBP-type profile. 69 146 IPR004333 GO:0003677
Acco06g2131 148 MobiDBLite consensus disorder prediction 56 71 - -
Acco06g2131 148 MobiDBLite consensus disorder prediction 1 71 - -
Acco06g2131 148 Pfam SBP domain 72 145 IPR004333 GO:0003677
Acco06g2131 148 MobiDBLite consensus disorder prediction 39 55 - -
Acco06g2131 148 FunFam Squamosa promoter-binding-like protein 14 63 133 - -
Acco06g2131 148 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 51 147 IPR044817 GO:0003677
Acco06g2131 148 MobiDBLite consensus disorder prediction 1 16 - -
Acco06g2131 148 SUPERFAMILY SBT domain 70 146 IPR036893 GO:0003677|GO:0005634
Acco06g2131 148 Gene3D - 67 133 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2131 Acco-ChrAcco06 16123317 16124721 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2131 65 148 SBP-box Gene Family AT2G33810 71.429 2.80e-41 132
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Acco06g2131 SBP 7.3e-33 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2131 06 16123317 16124721 Acco06g2131 06 16123317 16124721 ECH
Acco01g3261 01 49881204 49881981 Acco06g2131 06 16123317 16124721 ECH