Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2120 ATGGCTTCTTCTTCGTCTTCGCCATCGACTTCTTCTTCCATGTCGCGCGAGGGTCACTATAGAGGGGTGAGAAAGAGACCCTGGGGACGATACGCCGCCGAGATTCGCGACCCGTGGAAGAAAACGCGCGTTTGGCTGGGGACGTTCGACACGCCGGAAGAGGCGGCGCTGGCCTACGACGGCGCTGCCCGTTCCCTCCGTGGCCCAAAGGCTAAAACCAACTTCCCTGCGGCTCCGGTGGCCACCGGAGGACTGTCCCTCGACCTCAACGCCCCGACCTCGGATCATCGCTGGCCGCCCATCCCCTCTGGTCGCCTCGTGCTGAACGAGCTTCTCCATGCGGGTGTTCTCAAGGATGTGTCATTCGATCATCCTCCGCCCTCGCCTGCACCTCCCATTGCCATGGTTCACAACCGGCGTGACGGTCCTGCCTCCGTGGACGGTGGTGGCCATCATCAGATACCGGAGAGCTCTCCCACGGCTTCATTCCTCGGCCTTGTTCGGCGAGGCCTTCCGATCGACTTGAACGAACCTCCTCCTGTGTGGCCCTGA 552 0.625 MASSSSSPSTSSSMSREGHYRGVRKRPWGRYAAEIRDPWKKTRVWLGTFDTPEEAALAYDGAARSLRGPKAKTNFPAAPVATGGLSLDLNAPTSDHRWPPIPSGRLVLNELLHAGVLKDVSFDHPPPSPAPPIAMVHNRRDGPASVDGGGHHQIPESSPTASFLGLVRRGLPIDLNEPPPVWP 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2120 183 SMART rav1_2 19 82 IPR001471 GO:0003700|GO:0006355
Acco06g2120 183 MobiDBLite consensus disorder prediction 1 17 - -
Acco06g2120 183 MobiDBLite consensus disorder prediction 1 22 - -
Acco06g2120 183 PRINTS Ethylene responsive element binding protein signature 42 58 IPR001471 GO:0003700|GO:0006355
Acco06g2120 183 PRINTS Ethylene responsive element binding protein signature 20 31 IPR001471 GO:0003700|GO:0006355
Acco06g2120 183 Pfam AP2 domain 19 68 IPR001471 GO:0003700|GO:0006355
Acco06g2120 183 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 10 108 - -
Acco06g2120 183 FunFam Ethylene-responsive transcription factor 2 19 77 - -
Acco06g2120 183 Gene3D AP2/ERF domain 19 77 IPR036955 GO:0003700|GO:0006355
Acco06g2120 183 ProSiteProfiles AP2/ERF domain profile. 19 76 IPR001471 GO:0003700|GO:0006355
Acco06g2120 183 SUPERFAMILY DNA-binding domain 19 77 IPR016177 GO:0003677
Acco06g2120 183 CDD AP2 19 78 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2120 Acco-ChrAcco06 16019721 16020272 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2120 11 182 AP2-EREBP Transcription Factor Family AT1G28360 46.635 1.90e-42 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco06g2120 AP2 1.7e-14 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2120 06 16019721 16020272 Acco06g2120 06 16019721 16020272 ECH