Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2095 ATGGTTAATTTTGGCGCGCATGTCATGTCCGGGCCTGAAACAGATGATATTCATCACCTCCCGAAAGTTCCACACTGTTCTGAATCTCATTCCGAAGTTCTAATCCTCAGAAGACGAAGAAGTATGGGTGTTGACTACTATAAGATTCTGCAGGTTGATAAGAATGCCACGGATGAAGATTTGAAGAAAGCTTACCGAAAGCTTGCCATGAAATGGCACCCTGATAAGAACCCGAACAATAAGAAAGAGGCTGAGGCCAAATTCAAACAAGTCTCAGAAGCCTACGAGGTTCTGAGTGATCCTCAGAAGAGAGCAATTTATGATCAGTATGGAGAAGAAGGGCTCAAAGGGCAGGAGCCACCTCCAGATGCCGGTGGGGCTTCATTCTTCCCCACTGGAAATGGTCCAACGACTTTTAGGTTTAATCCCAGAAATGCAGACGATATTTTTGCTGAATTTTTCGGATTTTCAAGCCCATTTGGTGGAAGGGGTGGCGGCGACGGCATGAGAGGTGGCTCGAGGTCCTTCGGTGGAATGTTTGGGGATGATATATTCAGCTCATTTGGAGAAGGAAGGCCTATGAGTCAAGGTCCACGGAAGGCACCTCCTATTGAAAACACATTGCCTTGCAGCCTTGAGGAGCTCTATAAGGGGACTACCAAGAAGATGAAAATCTCAAGGGAACTTGTAGATGCAAGCGGAAAAACCTTACCAGTGGAGGAAATCTTAACCATTGAGATCAAACCGGGTTGGAAAAAGGGAACGAAGATCACCTTCCCGGAGAAAGGAAACGAACAGCCAAACGTGATCCCTGCAGATCTGATATTCATCATTGATGAGAAACCCCACAGTGTGTTTACAAGGGATGGTAATGATCTGGTAGTGACACAAAAGATATCACTTGCAGAAGCTTTAACAGCCTACACTGTGCATCTCACTACTCTGGATGGTAGGACTCTGAACATTCCCATAAACAACGTAATACATCCAACCTATGAAGAGGTTGTCCCAAAGGAAGGCATGCCAATCCCCAAAGAACCTTCAAGGAGAGGCAACCTTAGGATTAAGTTCAACATCAAATTCCCAACAAGGTTGACGTCGGAGCAGAAAGCTGGAATTAAGAAACTTTTAGGGCCATAA 1140 0.4535 MVNFGAHVMSGPETDDIHHLPKVPHCSESHSEVLILRRRRSMGVDYYKILQVDKNATDEDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQVSEAYEVLSDPQKRAIYDQYGEEGLKGQEPPPDAGGASFFPTGNGPTTFRFNPRNADDIFAEFFGFSSPFGGRGGGDGMRGGSRSFGGMFGDDIFSSFGEGRPMSQGPRKAPPIENTLPCSLEELYKGTTKKMKISRELVDASGKTLPVEEILTIEIKPGWKKGTKITFPEKGNEQPNVIPADLIFIIDEKPHSVFTRDGNDLVVTQKISLAEALTAYTVHLTTLDGRTLNIPINNVIHPTYEEVVPKEGMPIPKEPSRRGNLRIKFNIKFPTRLTSEQKAGIKKLLGP 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2095 379 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 42 377 - -
Acco06g2095 379 SUPERFAMILY HSP40/DnaJ peptide-binding domain 285 371 IPR008971 GO:0006457|GO:0051082
Acco06g2095 379 FunFam DnaJ subfamily B member 13 283 363 - -
Acco06g2095 379 SUPERFAMILY HSP40/DnaJ peptide-binding domain 198 289 IPR008971 GO:0006457|GO:0051082
Acco06g2095 379 ProSiteProfiles dnaJ domain profile. 45 111 IPR001623 -
Acco06g2095 379 ProSitePatterns Nt-dnaJ domain signature. 88 107 IPR018253 -
Acco06g2095 379 Gene3D - 203 281 - -
Acco06g2095 379 SMART dnaj_3 44 103 IPR001623 -
Acco06g2095 379 Gene3D - 283 363 - -
Acco06g2095 379 CDD DnaJ 45 100 IPR001623 -
Acco06g2095 379 Gene3D DnaJ domain 43 165 IPR036869 -
Acco06g2095 379 SUPERFAMILY Chaperone J-domain 44 141 IPR036869 -
Acco06g2095 379 PRINTS DnaJ domain signature 65 80 IPR001623 -
Acco06g2095 379 PRINTS DnaJ domain signature 47 65 IPR001623 -
Acco06g2095 379 PRINTS DnaJ domain signature 103 122 IPR001623 -
Acco06g2095 379 PRINTS DnaJ domain signature 83 103 IPR001623 -
Acco06g2095 379 Pfam DnaJ C terminal domain 204 362 IPR002939 -
Acco06g2095 379 MobiDBLite consensus disorder prediction 113 133 - -
Acco06g2095 379 FunFam Dnaj homolog subfamily b member 200 281 - -
Acco06g2095 379 FunFam DnaJ subfamily B member 13 44 164 - -
Acco06g2095 379 Pfam DnaJ domain 45 108 IPR001623 -
Acco06g2095 379 CDD DnaJ_C 202 365 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2095 Acco-ChrAcco06 15834961 15837217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2095 40 110 C2H2 Transcription Factor Family AT1G74250 38.667 1.21e-09 58.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2095 06 15834961 15837217 Acco06g2095 06 15834961 15837217 ECH