Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2094 ATGTTAAAGCTGGCCTTTTCATTTCCCTTGGTCTCAGAAATAAATAATGGAGTTTTCGATCTTGATTGGCTTTCTTCAATGGAGGCCGAGTCTGCTTCAGACGGGGAGAATAATCGGAAAAGGGATGCCGCTGATGATTACAATGACGACAATACTGGAAGTAACAAAAAAATTGTAAATTCTAATGAAGGGCAGAGCAAGCCCAAGCGTCAGATGAAGACTCCTTTCCAGCTTGATGCCCTAGAGAAAGCTTATGCTTTGGAGACTTACCCGTCGGAGGCGATGAGGGCGGAGCTGTCGCAGAAGTTGGGGCTGTCGGATCGGCAATTGCAGATGTGGTTCTGCCATAGGAGGTTGAAAGATAAGAAGGACGTTTCTAAGTCTTCACGAAAGGCGCCACCGCCGTTGCCTGCTTCACCGACGGATGACTTGAGGATGGAGACCGAACTCGCCAATGATTATGGATCCGGGTCGGGTTCGGGCTCAAGCCCGTTCACGCGTTCAGAGTTGCGGAATGTAGTACCTAGGGGAGTTCCTGGGTACTATGAGTCGCAGCAGGCTCTTATGGAGCTCAGAGCAATTGCTTGTGTGGAGGCACAATTAGGAGAACCATTAAGGGAAGATGGACCTATTTTAGGAGTGGAGTTTGATCCATTGCCGCCAGATGCATTTGGAGCACCTATAGCAGTTACTGAGCAGCCGAAGCGGCCTAGTCTTGGCTTTGATAGTAAAGTCTATGAAAGACATGATGCTAGATCAAATAAGGCTACAAGAGCTTTCCATGAATATCCATTTCTCCCAAACCACTCCAGTATTAGATCTGATGCTTATGGACAATTGGCACAATCTCATTTACTTGATCCAATGGATGGTCCGGCCAGAACTCCATCTTTTATGGTAAAAAATGAACAACTTCCCAGGATTCATGCTGCCCAAGGTCATTCTTCACGTGTTCGTGTTTCATCACTACAAGATAAACAAGGGCATCCATTTCAATCACCCCCTTGTGATGATGATGGCCCCTCCCAAAGGGAACCTTACACAAATCTAAATATTGGAATGAATTCTCACTTTGCTGATCACCCAATTGTTGGACCAGAAAACCCTTATTCTGCAGTCAGTGGACCAATTTTCCATGGTGATGCAATATTACGGGTGGACAGGAAACGAAAGAGTGATGATTCCAGAACTGTGAGAGAAGCTGAAGCCCATGAGATGAGGATCCAGAAGGAGATAGAGAAACAAGATAACATTCGGCGAAAGAATGAAGAAAGGATGAGGAAAGATATGGAGAGGCAAGATCGAGAAAGAAGGAAGGAAGAAGAGAGGTTAATGCGTGAGAGACAAAGAGAAGAAGAAAGAACAAAGCGTGAACAAAGACGTGAAATTGAACGAAGGGAAAAGTTTCTGATGAAAGAAAATCTAAGAGCTGAGAAAAAGAGGCAAAAAGAAGAACTTCGAAAAGAGAAAGAAGCAGAGAGAAGGAAAGCTGCTCTTGAGAAGGCAGTTGCCCGCAGAATAGCTAAAGAATCTATGGAGCTTATTGAGGATGAACAACTGGAATTGATGGATTTGGCTGTGGCAAGCAAGGGACTTCCCTCAATTATAAATCTTGATCTTGACACTTTGCAAAACCTTGACATGTTTCATGATTCATTATGCACTTTTCCACCTAAGAGTGTGAAGCTGAAAAAACCTTTTGCCATCCAACCCTGGATCAAATCTGAGGAGCGTGTTGGCAACCTTCTCATGGTTTGGAGATTTCTGATTACATTTGCAGATGTCCTTGAGTTGTGGCCTTTTACTCTTGATGAGTTTTTGCAGGCATTTCATGACTATGATTCAAGATTATTTGGTGAGATACATGTTGCTCTTCTCAAGGTGATAATAAAGGACATCGAAGATGTTGCAAGGACACCTACAGGATTAGGTACAAACCAGAATGGGACTGCTAATCCCGGGGGTGGCCATCCAGAGATTGTCGAAGGGGCATATGCATGGGGCTTTGATATAAGAAATTGGCAGAAGCACTTGAATCAATCAACTTGGCCAGAAATTTTCCGACAGTTAGCATTATCTGCAGGGTTTGGACCACGGCTGAAGAAAAGAAATATCTCATGGTCATATGCAAATGATAAAGACGAGCAGGGTAGAAGTTGTGAAGACATCATCTCCACACTTCGCAATGGTTCAGCTGCTGAAAATGCAGTCGCAAAAATGCAAGAGAAAGGGCTATTAGCCCCTCGAAGAAACAGGCATCGGTTGACTCCTGGAACAGTCAAGTTTGCAGCATTTCATGTTTTGTCTCTAGAGGGTAGCAAGGGGTTGACAGTACTAGAGCTTGCAGAAAAAATTCAGAAATCTGGACTTCGGGACCTGACAACCAGCAAGACGCCTGAGGCATCAATTTCTGTTGCTTTAACTAGAGATGCTAAGCTTTTTGAAAGAATAGCTCCCTCAACATATCGAGTTCGAGCTGCATATAGAAAAGATCCTGCTGATGCGGAGGCCATACTTTCAGATGCTAGAAAGAAAATTCAGATATTTGAAAATGGGTTTTCTGCTGTTGAAGATGCTGATGATGTTGAAAGGGAAGAAGTGTCGGAAAGTGATGAAGTTGATGAGGATCCTGAAGTAGATGATTTAGTAAATCCCCTTAGTGATAACAAAACATCTGAACAATATGATGACCTGAATAATTGCTCTACAAATGCAAGAGAAAATATGACCCATGACATGGAACTTATTCAAAATGAGTTTGGCAAGGATCTTCCTTGTGTTACTGAGAATTGTTCCAAGGATGCTGATTGTCCAAGTGCCATCATCACTGGACAGCTTGGGGTTGTTGAAGATTTGAGTACTGGAAATCCTGAAGATAATATGGAAATTGATGAAAGCAAGTCTGGAGAGTCATGGGTTCAAGGTCTTACAGAAGGAGAGTATTCTGACCTTAGTGTAGAAGAACGCCTTAATGCTCTAGTAGCATTGGTTGGTGTTGCAAATGAAGGAAATTCAATACGTCTTGTTCTTGAGGACCGATTAGAGGCAGCAAATGCTCTGAAGAAGCAAATGTGGGCAGAAGCACAGATAGAGAAAGTTCGGCAGAAAGATGATAATTGTAATAAATCTGATTTTCCATCTCTTAGTGCAAATAAAGTCGAGACACAATATACAGGCCCTGCTGCAGAGTTAAACCAGAGCCCATTGCCTGACATCAATATTAATAATAATGAGGCATCACCTATCACTGCAGAAAATCAAAAAGAAGTTCTCGGTGCACAGAATATGCCTATTGAAAAGCCCTCAGTTGTTCAAGATCTCTTTATAGGTCCAGACAACTTGCAGATTCTATCTGCACATGCTTCAAAAAGGTCTCGTTCACAGTTGAAGTCCTATATTGCGCATTTAGCAGAAGAGATGTATGTATATAGGTCCTTGCCCCTTGGTCAAGATCGGAGACATAACCGATATTGGCAATTTGTTGCATCTGCTTCCAGCAGTGATCCTGGTGCTGGCAGGGTCTTCATTGAATTACATGACGGCAGCTGGAGGCTTATTGATTCTGAAGAGGACTTTGATGCACTTTTGGTATCCCTCGATTCACGTGGAATTAGGGAATCTCATTTACGCTTAATGTTGCAGAAGATTGAGAATTCCTTCAAGGAAAATGTTCGAAGGAATGCTCAATTTAACAAAATTGCTACCAAATCAATTAAAAATGAAGTTGATGAAGTGGAACTAGTTCCTGAATGCCGTGCTGGATCAGACAGTTCTGGCAGTACTCTTTGTGGTTTGAATTCTGACAGTACATTGGAAACTTCTTCGTCCTTTAAAATTGACCTGGGGAGAAGTGAGAGTGAAAAAAAAGCGGCCTTGAGAAGGTATCAAGATGTTCAAAAGTGGATATGGAAAGAATGTTATAATTCATCAACGTTATATTCAACGAAATATGGGCAAAGGAGATGCAAACCACTGCTGGAAATATGTGATATGTGTTTGAATCCGTACTTCTTGGAAGATTCCCATTGTAATTCTTGCCACCATACTTTTGCGACTAATAATGGATTTAATTTTTCTAAACATGCATTTCAATGCGGAGAGAAGTTAGATTCCCAAGGTATTTGTACTTGGGATTCTTCTCTTCCCTTGCGGATTAGGTTGCTCAAGGCCTTGTTGGCTTGTATTGAGGCTTCTGTTCCTCTTGAATCATTACAATCAATTTGGACAGAAGGGCATAGGAGGCAGTGGGGAGTGAAGTTGAGCAAATCTTCTACAACTGATGAACTCTTGCAGTTGCTGACCTTGTTGGAGAGAGCAGTACAGCGAGACTTCCTGTCATCAAACTTTTCTACGACAGAAGAAATGTTGGGATCAAGCTGTATGGCTGAAGATGCTGTAAATGCTTCTATTGATACTGAATCAGTTCCTGTGCTGCCATGGGTACCACAAACCGCTGCAGCCATATCATTGAGAATCTTTGAGTTCGATGCATCCATCAGTTACACACCGGCTGAGAAACCTGAGCAAGAGAAGGAAGTGAGGGAATATGTGAAGCTCCCTTCAAGATATGCTCCCTTCAAATCTGGTAGAGCTATTGAATCAGCAGAATTAGACCATGATGAATTCATGAAGGAAGACAAATCTAATAAAAGTGTTCGGGGTAGCAATAAACGTGGACGAGGGTCTCATGATCATGGGCGGGGCAAAAAGTTGGCTAGAAGAACACAACATACCGGGCGCCGAAATGCTAAAGGTGCTGAGAATTATGGTCAAGGATTAAAACAGCAGGGGAGAGGGACACAAGGACAACCTGGTGGGCGTGGTCGCCGAACAGTCAGGAAAAGAAGAGTGGAAAAAAGGGCCGTTGAGGACTTGCTGCTGGGCCACAAGGGTGCCGGTCAAAGTCCCAAGATGAGTAGAGAATCGTTGAGAAGTTTGGAAGAGGAATGGGACGGCGAGAAGGAATCAAGTCCCGTCCAAATGGATGGTGTTGATAATAGTAACAGTGCTGATGAAGTGGAATCTGATGACAATGGGCAAGCAGTGGAGTATGATGAGCAAGGAAACTGGGAGGTGGGTTTCAATGGTGTTAGTTCCAACACATGGGATAGGGATATGGTTGAAGCGAGCGATGAGGAAGTGGTGGGTGCTTCTGAAGATGACAATGGCATTGAAGAGGGGGAAGAGGAGTTGGAAGAAGATTCAGAGGAAGAGGTTATGAGTGAGGGAGAGGATTCGGATGGTGAGGGCAATAATAGAATGATGGTAAATGAAGAAGGTTCAGACTCAGCTGTCTCTGAGGATTCTTCTGATTAG 5316 0.4323 MLKLAFSFPLVSEINNGVFDLDWLSSMEAESASDGENNRKRDAADDYNDDNTGSNKKIVNSNEGQSKPKRQMKTPFQLDALEKAYALETYPSEAMRAELSQKLGLSDRQLQMWFCHRRLKDKKDVSKSSRKAPPPLPASPTDDLRMETELANDYGSGSGSGSSPFTRSELRNVVPRGVPGYYESQQALMELRAIACVEAQLGEPLREDGPILGVEFDPLPPDAFGAPIAVTEQPKRPSLGFDSKVYERHDARSNKATRAFHEYPFLPNHSSIRSDAYGQLAQSHLLDPMDGPARTPSFMVKNEQLPRIHAAQGHSSRVRVSSLQDKQGHPFQSPPCDDDGPSQREPYTNLNIGMNSHFADHPIVGPENPYSAVSGPIFHGDAILRVDRKRKSDDSRTVREAEAHEMRIQKEIEKQDNIRRKNEERMRKDMERQDRERRKEEERLMRERQREEERTKREQRREIERREKFLMKENLRAEKKRQKEELRKEKEAERRKAALEKAVARRIAKESMELIEDEQLELMDLAVASKGLPSIINLDLDTLQNLDMFHDSLCTFPPKSVKLKKPFAIQPWIKSEERVGNLLMVWRFLITFADVLELWPFTLDEFLQAFHDYDSRLFGEIHVALLKVIIKDIEDVARTPTGLGTNQNGTANPGGGHPEIVEGAYAWGFDIRNWQKHLNQSTWPEIFRQLALSAGFGPRLKKRNISWSYANDKDEQGRSCEDIISTLRNGSAAENAVAKMQEKGLLAPRRNRHRLTPGTVKFAAFHVLSLEGSKGLTVLELAEKIQKSGLRDLTTSKTPEASISVALTRDAKLFERIAPSTYRVRAAYRKDPADAEAILSDARKKIQIFENGFSAVEDADDVEREEVSESDEVDEDPEVDDLVNPLSDNKTSEQYDDLNNCSTNARENMTHDMELIQNEFGKDLPCVTENCSKDADCPSAIITGQLGVVEDLSTGNPEDNMEIDESKSGESWVQGLTEGEYSDLSVEERLNALVALVGVANEGNSIRLVLEDRLEAANALKKQMWAEAQIEKVRQKDDNCNKSDFPSLSANKVETQYTGPAAELNQSPLPDININNNEASPITAENQKEVLGAQNMPIEKPSVVQDLFIGPDNLQILSAHASKRSRSQLKSYIAHLAEEMYVYRSLPLGQDRRHNRYWQFVASASSSDPGAGRVFIELHDGSWRLIDSEEDFDALLVSLDSRGIRESHLRLMLQKIENSFKENVRRNAQFNKIATKSIKNEVDEVELVPECRAGSDSSGSTLCGLNSDSTLETSSSFKIDLGRSESEKKAALRRYQDVQKWIWKECYNSSTLYSTKYGQRRCKPLLEICDMCLNPYFLEDSHCNSCHHTFATNNGFNFSKHAFQCGEKLDSQGICTWDSSLPLRIRLLKALLACIEASVPLESLQSIWTEGHRRQWGVKLSKSSTTDELLQLLTLLERAVQRDFLSSNFSTTEEMLGSSCMAEDAVNASIDTESVPVLPWVPQTAAAISLRIFEFDASISYTPAEKPEQEKEVREYVKLPSRYAPFKSGRAIESAELDHDEFMKEDKSNKSVRGSNKRGRGSHDHGRGKKLARRTQHTGRRNAKGAENYGQGLKQQGRGTQGQPGGRGRRTVRKRRVEKRAVEDLLLGHKGAGQSPKMSRESLRSLEEEWDGEKESSPVQMDGVDNSNSADEVESDDNGQAVEYDEQGNWEVGFNGVSSNTWDRDMVEASDEEVVGASEDDNGIEEGEEELEEDSEEEVMSEGEDSDGEGNNRMMVNEEGSDSAVSEDSSD 1771
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2094 1771 MobiDBLite consensus disorder prediction 31 73 - -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 310 348 - -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 315 329 - -
Acco06g2094 1771 Gene3D - 51 127 - -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 33 52 - -
Acco06g2094 1771 SUPERFAMILY Homeodomain-like 57 123 IPR009057 -
Acco06g2094 1771 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 52 1771 IPR044977 GO:0006357
Acco06g2094 1771 MobiDBLite consensus disorder prediction 1562 1579 - -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 885 899 - -
Acco06g2094 1771 Coils Coil 423 503 - -
Acco06g2094 1771 ProSiteProfiles HARE-type HTH domain profile. 758 827 IPR007759 GO:0006355
Acco06g2094 1771 MobiDBLite consensus disorder prediction 1538 1771 - -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 1641 1658 - -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 388 460 - -
Acco06g2094 1771 ProSiteProfiles 'Homeobox' domain profile. 64 124 IPR001356 GO:0003677
Acco06g2094 1771 MobiDBLite consensus disorder prediction 859 899 - -
Acco06g2094 1771 Pfam DDT domain 577 632 IPR018501 -
Acco06g2094 1771 Pfam Homeodomain 67 123 IPR001356 GO:0003677
Acco06g2094 1771 CDD homeodomain 69 123 IPR001356 GO:0003677
Acco06g2094 1771 Pfam WSTF, HB1, Itc1p, MBD9 motif 1 968 1008 IPR028942 -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 53 72 - -
Acco06g2094 1771 ProSiteProfiles DDT domain profile. 576 635 IPR018501 -
Acco06g2094 1771 Pfam HB1, ASXL, restriction endonuclease HTH domain 758 826 IPR007759 GO:0006355
Acco06g2094 1771 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 1144 1216 IPR028941 -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 1712 1745 - -
Acco06g2094 1771 SMART testlast3 576 635 IPR018501 -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 1538 1561 - -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 859 882 - -
Acco06g2094 1771 SMART HOX_1 66 128 IPR001356 GO:0003677
Acco06g2094 1771 MobiDBLite consensus disorder prediction 951 972 - -
Acco06g2094 1771 MobiDBLite consensus disorder prediction 123 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2094 Acco-ChrAcco06 15820969 15833172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2094 30 1695 Homeobox Transcription Factor Family AT1G28420 49.483 0.0 1361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Acco06g2094 WSD 1.1e-14 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2094 06 15820969 15833172 Acco06g2094 06 15820969 15833172 CCT
Acco06g2094 06 15820969 15833172 Acco06g2094 06 15820969 15833172 ECH