Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2091 ATGCTTCCCCTGTTCTTCCTGCTCTGTTTTCTCTTCCCTCCTCCTACTGTCATCTCTCTCAACCAGGATGGTCTCTCACTCTACAAATTCAAGCTCTCCATGAACGACCCTGACTCCTCCCTATCCTCCTGGAACGACGGCGACGCCCACCCCTGCTCATGGTCCGGCGTCACCTGCGACCCCACCAACACCTCCGTCACCGAGCTCGACCTCTCCAGCTCCAACATCGCCGGCCCATTCCCTGCTTCAATTCTCTGCAACCTCACCAACCTCACCACCCTCATCCTCTACAATAACTCCATTAACGACGCCCTCCCACCGGAAGTCTCTCTCTGTCGCAACCTCGTTCATGTCGACCTCGCCCAGAACCTCCTCACTGGTGCTCTGCCTGCAACCTTATCGGATCTTCCTAACCTCCGGTATCTGGACTTAACCGGCAACAACTTCTCCGGCGTCATACCCGATTCATTTGCCAACTTTCAGAAGCTCGAGGTACTCTCACTTGTCTACAATCTTCTAGACGGAACAATACCCGCTTCCCTCGGAAATATTACCACCCTCAAGATGCTCAACCTCTCTTACAACCCATTTTCACCGGGTCGGATCGCTCCGGAGCTCGGCAACCTGGCCAATCTTGAGGTCATGTGGCTCACTCAGTGTAACTTGGTCGGCGTGATCCCTGGATCGTTCGGCAAGCTGAAGAAACTCAGGGATTTAGACCTTGCGTTGAACAATCTGGAAGGTTCGATTCCGAGTTCACTCATTGAGATGACGAATTTGAAGCAGATTGAGTTGTATAACAACTCGCTGTCCGGTGAGTTGCCTCGAGGAATGGGGAACCTCACGGCATTGAGGCTAGTCGACATAGCTATGAACCGGTTGAGTGGGACGATTCCAGACGAGTTGTGTCGATTACCACTGGAAAGCCTTAACCTTTACCAGAATCAGTTTGAAGGTGAGTTGCCGGAGAGCATAGCAAACTCGCTGAATCTTTATGAACTCAGACTGTTTGCTAACAAACTAACTGGAAAACTGCCTAGTAATCTCGGAAAGAATGCGCCTTTGAGGTGGGTTGACGTTTCTAACAATCAATTCTCGGGAGAAATTCCGGCGACTCTGTGTGACAACGGGAAATTGGAAGAGCTTCTAATGATATACAACTCATTTTCCGGCAATATCCCGGCTAGTTTGGGCAGATGTCGGAGTTTGATGCGGGTCCGGTTTGGTTTCAATCGGTTGTCTGGTGAAGTCCCGGCGGCTATTTGGGGGCTTCCACATGTGTATCTACTTGAACTCGCTGATAACTCATTTTCTGGTTCAATCGCGAAAACTATTGCCGGTGCCGGAAATCTCTCGTTGTTGACTTTATCTAGGAACAATTTCACTGGACCGATCCCTGAAGAGATTGGATGGCTAGAAAAGCTTGAAGAATTCTCTGGTAATGATAATTTGTTCAATGGATCATTGCCTGCTAGCATTGTGAAACTCGGACAGCTTGGGACTCTTGATCTTCATAACAATAAAATTTCAGGTGAGCTTCCAAATGGGATTCGATCCTGGAAGAAACTCAATGAGATTAATCTTGCAAATAATGAGATTGGTGGAAATATTCCTGACGAAATTGGGAGTTTGTCGGTGCTCAATTTTCTTGATCTTTCCAATAATCAATTTTCCGGCGTGGTGCCTGCTGAATTGCAGAATTTGAAGCTCAATAGGTTAAATATGTCTTACAACCATCTCTCTGGAGAACTTCCTCCTATGTTGGCTAAGAATATGTACATGACAAGTTTTCTGGGTAATCCTGGTTTGTGTGGGGATTGGAACAGTTTGTGTAATGGCAGAGATGAAGCTAAGACAAGAGGGTATTCTTGGTTGCTCCGAATTATTTTCATCATTGCTACTGTTTTCTTTGTCGTAGGTTTGGTCTGGTTTTATTCCAAGTATAAGAACTTTAAAAGGTCAAAAAGAGCCATTGACAAATCAAGATGGACACTGATGTCATTTCATAAACTGGGTTTCGGTGAAGATGAAATTCTGAACTGCCTGGATGATGACAGTGTCATAGGAAGTGGATCATCTGGCAAGGTGTACAAGGTTGTTCTTACCAGTGGGGAGGTTGTTGCAGTAAAGAAGCTATGGGGAGGCATTAAAAAGGAAATGGAAAGTGAGGATATTGAAAAAGGTGGTGTTCAAGACCATGCCTTTGATGCCGAAGTTGAAACCTTGGGTAAAATTAGGCACAAAAACATAGTGAAGCTTTGGTGTTGCTGCACCACAAGGGACTGCAAGCTCTTAGTTTATGAGTACATGCCGAATGGTAGTCTCGGTGATTCGCTTCATGGAAGTAAAGGCGGGTTGTTGGACTGGCCAACTAGGTATAAGATAGCCCTTGATGCAGCAGAAGGTCTCTCTTATCTGCATCATGATTGTGTTCCTCCAATTGTTCACAGAGATGTAAAATCCAACAATATTCTGTTGGATGCACACTTCGGCGCGAGGGTGGCTGATTTTGGTGTAGCCAAGGTTGTTGAAACCAATGGCAAAGGAACCAAATCCATGTCTGTCATTGCTGGCTCTTGTGGATACATTGCACCAGAATATGCATACACATTGAGGGTGAATGAGAAAAGCGACATATACAGCTTTGGCGTGGTGATACTTGAGTTGGTGTCCGGAAGGCGACCAGTTGAGCCAGAGTTTGGGGAGAAAGATCTGGTGAGGTGGGTTTACACGACGTTGGACCAGAAAGGAGTGGAGCATGTGATCGACTCGAGGCTGGATTCTTGTTACAAAGATGACATATGTAGGGTTCTTGACATTGGCCTCATGTGCACAAGTTCTCTTCCCATCAACCGCCCCGCCATGAGACGAGTGGTGAAGATGCTTCAAGAGAACCAAACCAAGGCTATCAAGAAAGAAGGCAAGTTGTCACCTTATTACTGTGATGATGCCTCAGATCATGGAAGTGTAGCCTAA 2976 0.4651 MLPLFFLLCFLFPPPTVISLNQDGLSLYKFKLSMNDPDSSLSSWNDGDAHPCSWSGVTCDPTNTSVTELDLSSSNIAGPFPASILCNLTNLTTLILYNNSINDALPPEVSLCRNLVHVDLAQNLLTGALPATLSDLPNLRYLDLTGNNFSGVIPDSFANFQKLEVLSLVYNLLDGTIPASLGNITTLKMLNLSYNPFSPGRIAPELGNLANLEVMWLTQCNLVGVIPGSFGKLKKLRDLDLALNNLEGSIPSSLIEMTNLKQIELYNNSLSGELPRGMGNLTALRLVDIAMNRLSGTIPDELCRLPLESLNLYQNQFEGELPESIANSLNLYELRLFANKLTGKLPSNLGKNAPLRWVDVSNNQFSGEIPATLCDNGKLEELLMIYNSFSGNIPASLGRCRSLMRVRFGFNRLSGEVPAAIWGLPHVYLLELADNSFSGSIAKTIAGAGNLSLLTLSRNNFTGPIPEEIGWLEKLEEFSGNDNLFNGSLPASIVKLGQLGTLDLHNNKISGELPNGIRSWKKLNEINLANNEIGGNIPDEIGSLSVLNFLDLSNNQFSGVVPAELQNLKLNRLNMSYNHLSGELPPMLAKNMYMTSFLGNPGLCGDWNSLCNGRDEAKTRGYSWLLRIIFIIATVFFVVGLVWFYSKYKNFKRSKRAIDKSRWTLMSFHKLGFGEDEILNCLDDDSVIGSGSSGKVYKVVLTSGEVVAVKKLWGGIKKEMESEDIEKGGVQDHAFDAEVETLGKIRHKNIVKLWCCCTTRDCKLLVYEYMPNGSLGDSLHGSKGGLLDWPTRYKIALDAAEGLSYLHHDCVPPIVHRDVKSNNILLDAHFGARVADFGVAKVVETNGKGTKSMSVIAGSCGYIAPEYAYTLRVNEKSDIYSFGVVILELVSGRRPVEPEFGEKDLVRWVYTTLDQKGVEHVIDSRLDSCYKDDICRVLDIGLMCTSSLPINRPAMRRVVKMLQENQTKAIKKEGKLSPYYCDDASDHGSVA 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2091 991 FunFam Receptor-like protein kinase HSL1 306 613 - -
Acco06g2091 991 SMART serkin_6 682 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2091 991 Pfam Leucine rich repeat 137 196 IPR001611 GO:0005515
Acco06g2091 991 Pfam Leucine rich repeat 211 270 IPR001611 GO:0005515
Acco06g2091 991 Gene3D Phosphorylase Kinase; domain 1 667 769 - -
Acco06g2091 991 SUPERFAMILY RNI-like 68 426 - -
Acco06g2091 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Acco06g2091 991 Gene3D Ribonuclease Inhibitor 258 329 IPR032675 -
Acco06g2091 991 Gene3D Ribonuclease Inhibitor 187 257 IPR032675 -
Acco06g2091 991 SMART LRR_typ_2 233 257 IPR003591 -
Acco06g2091 991 SMART LRR_typ_2 136 159 IPR003591 -
Acco06g2091 991 SMART LRR_typ_2 281 305 IPR003591 -
Acco06g2091 991 SMART LRR_typ_2 88 112 IPR003591 -
Acco06g2091 991 SMART LRR_typ_2 496 520 IPR003591 -
Acco06g2091 991 SMART LRR_typ_2 544 567 IPR003591 -
Acco06g2091 991 SMART LRR_typ_2 209 232 IPR003591 -
Acco06g2091 991 Gene3D Transferase(Phosphotransferase) domain 1 770 981 - -
Acco06g2091 991 FunFam LRR receptor-like serine/threonine-protein kinase ERL1 20 184 - -
Acco06g2091 991 Gene3D Ribonuclease Inhibitor 20 180 IPR032675 -
Acco06g2091 991 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 187 964 - -
Acco06g2091 991 Pfam Leucine rich repeat N-terminal domain 21 60 IPR013210 -
Acco06g2091 991 SUPERFAMILY Protein kinase-like (PK-like) 678 962 IPR011009 -
Acco06g2091 991 ProSitePatterns Protein kinases ATP-binding region signature. 688 711 IPR017441 GO:0005524
Acco06g2091 991 FunFam Leucine-rich receptor-like protein kinase family protein 202 300 - -
Acco06g2091 991 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 770 977 - -
Acco06g2091 991 Gene3D Ribonuclease Inhibitor 330 614 IPR032675 -
Acco06g2091 991 ProSiteProfiles Protein kinase domain profile. 682 980 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2091 991 Pfam Protein kinase domain 685 902 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2091 991 SUPERFAMILY L domain-like 355 605 - -
Acco06g2091 991 FunFam Receptor-like protein kinase HSL1 666 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2091 Acco-ChrAcco06 15779691 15782869 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2091 15 991 Receptor kinase-like Gene Family AT1G28440 68.623 0.0 1382
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Acco06g2091 Pkinase 2.2e-41 CL0016