Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2090 ATGAAGGGTAAATGGTTGTACTGTTCTGAAAATAATAAAAGCCAGTTTCAGGTGAACGATCTTATTTCTAACCGTATTGCCTATGATTTGGTCATGCTTGGTCTATCAATATCCCTCCTAGTCCTCAGCATAATCCTCTTCCTCGCCTGCAAAAAGAAACCAGTACAATTGGAAGAATCCCTCCCTGTAAAAATCTGTGCTCGTTCATACCCATTAACCTACATCGACGCCGCCACCGACGGCTTCAACCACCGGAGAATCGTTGGCAAGGGCCGACTTGGAACCGTGTACGCCGGTTTACTCGACAAAGAAGAACTCATAGCGGTCAAAAGGATTCACCCTTGGCTTGTCCTGAGCAACGCAGGATTCGGATTCTCCTCAGTGATGAAATGGCTCTCATCAGCTCAACACCCAAACATAGTTCCGATCACCTGTTTCTCAGAAGCCGCCGGCGAGAGAATCATAGTAAGTCAATTCGTGAGAATGGTCAGCCTCGACTTCTATCTTCATCAAAACCCAAGTGGGGCTTCACTTTTGGATTGGACTAAGAGGTTAAGAATCGCAGCAGGAACAGCAAGAGGGCTTCAATATCTTCACGAAGTGGCGGCACCAACCATAGTTCATGGCTGTGTTAAGTCATCGAACATCCTCATCGACGTAAACTTCTGTGCAAGAATCTCAGACTATGGACTAAACTTTCTGGCACCAAAAGAGAAAAAAGGAATAGTGGGATATGTGGATGAAGAGTATTGGGATGATAATAAAAAACTTGGTGGTGGTGGTGCTTGTAAGGAAAGTGATGTGTATGGATTAGGTGTGGTTTTGTTAGAGGTTTTGAGTGGAAGGAGCTGTGAAGAAGGTTTGTTGGTGAAATGGGCAGTGCCATTAATAAAAGGAATGAGATATAGTGAAGTGTTGGATCCAAGATTGGTGATTCCTTCAGATTTAAAGCCACTTGTGAGATTAGCTAAAGTTGCTTTGGCTTGTGTGGCTAATTCTAGAGAATGTAGGCCTTCCATTGCTCATGTAGCAACTATTTTGAACAATTTAGAGGTTGATGTAAGCATGTGA 1071 0.437 MKGKWLYCSENNKSQFQVNDLISNRIAYDLVMLGLSISLLVLSIILFLACKKKPVQLEESLPVKICARSYPLTYIDAATDGFNHRRIVGKGRLGTVYAGLLDKEELIAVKRIHPWLVLSNAGFGFSSVMKWLSSAQHPNIVPITCFSEAAGERIIVSQFVRMVSLDFYLHQNPSGASLLDWTKRLRIAAGTARGLQYLHEVAAPTIVHGCVKSSNILIDVNFCARISDYGLNFLAPKEKKGIVGYVDEEYWDDNKKLGGGGACKESDVYGLGVVLLEVLSGRSCEEGLLVKWAVPLIKGMRYSEVLDPRLVIPSDLKPLVRLAKVALACVANSRECRPSIAHVATILNNLEVDVSM 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2090 356 Pfam Protein tyrosine and serine/threonine kinase 85 345 IPR001245 GO:0004672|GO:0006468
Acco06g2090 356 Gene3D Transferase(Phosphotransferase) domain 1 161 355 - -
Acco06g2090 356 ProSiteProfiles Protein kinase domain profile. 82 350 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2090 356 PANTHER OS01G0253100 PROTEIN 65 350 - -
Acco06g2090 356 FunFam serine/threonine-protein kinase-like protein ACR4 49 159 - -
Acco06g2090 356 SUPERFAMILY Protein kinase-like (PK-like) 59 347 IPR011009 -
Acco06g2090 356 Gene3D Phosphorylase Kinase; domain 1 48 159 - -
Acco06g2090 356 FunFam Receptor protein kinase CRINKLY4 161 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2090 Acco-ChrAcco06 15774237 15779340 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2090 67 348 Receptor kinase-like Gene Family AT3G59420 38.176 8.55e-52 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Acco06g2090 PK_Tyr_Ser-Thr 1.7e-22 CL0016