Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2088 ATGACATGGTGCAATGAGTCTCATGATGAGGAAGGGATTCAATTAAGCAATCCCAAAACCTCTGAACAAAATCGAACCATAACTTGCCCGTCATGCGGACATACCCTAGAATTTCAAGATCAGGGGGACATACTTATTAACGAATTGCCGGGGCTGCCATCTGGGGTTAAGTTTGATCCGAACGAGCAAGAGATATTACAGCATTTGGAAGCTAAGATTGAGTGTGATGTTCGTAAGCTTCATCCTCTTATTGAACAATTCATTCCCACTCTTGAAGGCGAGAATGGTATCTGTTATACTCACCCAGAAAAGCTACCAGGAGTAAGGAAAGATGGACAGATTCGGCATTTCTTCCACAGGCCATCAAAAGCATACACAACAGGAACAAGAAAAAGAAGAAAGGTTCACAGTACAGATCACGAAGAAGGAGGAGGCGAAACTAGATGGCACAAAACAGGCAAAACAAGACCAGTCTTCGTTAATGGAGCAATCAAAGGGTTCAAGAAGATACTTGTGCTTTACACAAACTATGGAAGAAAAAGGAAGCCTGAAAAAACAAGCTGGGTGATGCATCAGTACCACCTTGGATCCAACGAAGAAGAGAAAGAAGGACAACTCGTGGTGTCCAAGGTTTTCTACCAGACACAACCTAGACGATGCGGTTCCATTAATAAGGATCATAGTTATTATGATGATGATAAAACAGTAGCAAACGACCAAACGGGAAGAACAAGTAATGATCGTGACACGTGCACAACATCATCCATAATAATACCTAATAGTAATAAGAATTATGGATCTGGTGGTGGTGTTTTGGAGTACTACACTTCTCCTTACAATATGAGTAGTTATGAGCATGTGGTGGTGGGTCAGGGTCATAATAGTAATATCGTTAGAGAAAGTTCGCCTCCTCAACTTATTCCCAACTTGGTCGTCCAAGGTGACGCTTCTTCTTTCTTTTCATTTAGCAATGGATTGAAGCAAACTAAGACATGA 996 0.4147 MTWCNESHDEEGIQLSNPKTSEQNRTITCPSCGHTLEFQDQGDILINELPGLPSGVKFDPNEQEILQHLEAKIECDVRKLHPLIEQFIPTLEGENGICYTHPEKLPGVRKDGQIRHFFHRPSKAYTTGTRKRRKVHSTDHEEGGGETRWHKTGKTRPVFVNGAIKGFKKILVLYTNYGRKRKPEKTSWVMHQYHLGSNEEEKEGQLVVSKVFYQTQPRRCGSINKDHSYYDDDKTVANDQTGRTSNDRDTCTTSSIIIPNSNKNYGSGGGVLEYYTSPYNMSSYEHVVVGQGHNSNIVRESSPPQLIPNLVVQGDASSFFSFSNGLKQTKT 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2088 331 MobiDBLite consensus disorder prediction 125 152 - -
Acco06g2088 331 MobiDBLite consensus disorder prediction 132 152 - -
Acco06g2088 331 Pfam No apical meristem (NAM) protein 53 195 IPR003441 GO:0003677|GO:0006355
Acco06g2088 331 SUPERFAMILY NAC domain 47 214 IPR036093 GO:0003677|GO:0006355
Acco06g2088 331 FunFam NAC domain-containing protein 73 61 218 - -
Acco06g2088 331 Gene3D NAC domain 61 218 IPR036093 GO:0003677|GO:0006355
Acco06g2088 331 ProSiteProfiles NAC domain profile. 52 214 IPR003441 GO:0003677|GO:0006355
Acco06g2088 331 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 13 242 IPR044799 GO:0003700
Acco06g2088 331 MobiDBLite consensus disorder prediction 1 24 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2088 Acco-ChrAcco06 15756498 15759566 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2088 1 221 NAC Transcription Factor Family AT4G28500 64.783 3.21e-110 321
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Acco06g2088 NAM 1.7e-20 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2088 06 15756498 15759566 Acco06g2088 06 15756498 15759566 ECH