Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2086 ATGGGTTTGATCGATCTCAACACTACTGAGGACGAAGAAACGCCGTCGTCTGGTTCCTCTGCTTCATTGTCTTCTCAATCCGGTATTAGCATTTCCGCCTCCACTTCTCCTTCTCCTTCCTCAGTGTGCTTGGAGCTATGGCACGCTTGTGCGGGTCCAATGATCTCGTTGCCGAAAAAAGGAATCATCGTCGTTTACTTCCCACAGGGCCACCTTGAGCAGCAGGCTCAGGATTTCCCGGTCACTGCTTACAATATTCCTCCCCATGTTTTCTGTCGCGTCGCAGATGTCAAACTCCATGCGGAGGAAGGTTTAGATGAGGTGTACTGTCAGGTGTCGCTGGTTCCTGAAAGTGAGCAAGCTGAAAAAAGATATCGAGGAGGTGAAATCGATGCTGACTATGAAGATGAGGATGCTGCAGCTGCAGTGAAGTCTACAACACCACATATGTTCTGCAAGACCCTGACAGCTTCTGATACTAGCACTCATGGTGGATTCTCTGTGCCTAGGCGAGCAGCTGAAGATTGCTTCCCTCCGCTGGATTACAATCAACAGCGTCCTTCGCAAGAGCTTGTGGCAAAGGATCTACATGGCCTGGAGTGGAAGTTCAGGCATATTTACAGGGGGCAGCCTCGCAGGCATTTGCTTACAACTGGTTGGAGTGCATTTGTAAACAAGAAAAAGCTTGTATCTGGAGATGCTGTGTTGTTTCTGAGGGGTGAGGATGGAGTTCTGAGATTAGGCATTCGTAGGGCATCTCAGTTGAAATGTGGTGGTAACTTTTCAGTTCCTTCGGGCCTGCATCTTAATCCCAGCGGTTTCATAGATGTGGTGAATGCAATATCTACAAGATGTGCCTTTAGTGTTTGTTACAATCCCAGGGTTTGCTCATCGGAGTTCATAATTCCACTTAACAAATTTTTGAAGAGCCTTGATCAATTTTATTCAGTTGGAATGAGGTTCAGGATGCGTTTTGAATCTGAAGATGCTGCTGAACGAAGATGCACGGGATTAGTTATTGGAATTAGCGATGCAGATCCTGTTAGATGGGCCGGGTCTAAATGGAGATGCCTTATGGTAAGGTGGGAAGACATGGAAAGCACTAGGCATAACAGGGTTTCCCCATGGGAAATTGAGCCATCCGGTTCTGCTTCCACTCCCAACAACTTCAATGCAGCTGGTTTAAAGAGGACCAGGATTGGTTTGCCTTCTTCAAAACAAGAATTTCCAGTTCCAAATGGGATTGGAACATTGGACTTTGGGGAACCATTGAGGTTCCAGAAGGTCTTGCAAGGTCAAGAAATTTTGGGTGTTAATATTCCTTTTGATGGTATTAGTGCTCAGAGTCGCCCCTTCTCTGAATTAAGGAGGCGCTATCCTAGTTCAACTGTTTCTGGTATTGCCCCTTCAGGAAATAATTTCAGAAATCCACAAGTCCATTCTGATGTTTCGTGCAATGGCATGAGTTTCAGTGAATCTTTCCGATTCCAGAAGGTCTTGCAAGGTCAAGAAATACTTCCAAGCCAACCATATGGAAGAGCTTTTTCTGGTAATGAGGTCCAAGGAAATGGTCGCTATGGAATTTTCGACAATTGTCAAATGCCAGGTTCCCGAAATGGATGGACTGCTCCGGCACAGGATAATTCTGCCAATTTGCATCCTTCTATTCCATCCGGGCAAGTGTCATCTCCATCATCTGTTTTCATGTTTCAGCAAGCAGTAAATCCTACTCCCAGCTGTGACTACAATAACAACAACATTATGAATCAGAGGATGGAGAGTAAAATGCAACATCGAGGACTAAATCCAAAGGTGGAATTCAAAGGTGGAAAATTTGCATCAGTCTCATCTTATGAGCCTGGTTTCTGTGGGAAAACACAGGGAAGAACTAAATCCATTGGCATGTTTGAGCATAATCAAATGGACACTTCACCATCTCGCGATTCTGTGTCAGCGCGGGGAGATGGTCAAGAGCTGACTTCCTCCTATAAAAGTAGCTGCAGGCTCTTTGGTTTTTCACTGACTCAGGAAAACCATATCGCAAATTGCAAGTGA 2055 0.4545 MGLIDLNTTEDEETPSSGSSASLSSQSGISISASTSPSPSSVCLELWHACAGPMISLPKKGIIVVYFPQGHLEQQAQDFPVTAYNIPPHVFCRVADVKLHAEEGLDEVYCQVSLVPESEQAEKRYRGGEIDADYEDEDAAAAVKSTTPHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYNQQRPSQELVAKDLHGLEWKFRHIYRGQPRRHLLTTGWSAFVNKKKLVSGDAVLFLRGEDGVLRLGIRRASQLKCGGNFSVPSGLHLNPSGFIDVVNAISTRCAFSVCYNPRVCSSEFIIPLNKFLKSLDQFYSVGMRFRMRFESEDAAERRCTGLVIGISDADPVRWAGSKWRCLMVRWEDMESTRHNRVSPWEIEPSGSASTPNNFNAAGLKRTRIGLPSSKQEFPVPNGIGTLDFGEPLRFQKVLQGQEILGVNIPFDGISAQSRPFSELRRRYPSSTVSGIAPSGNNFRNPQVHSDVSCNGMSFSESFRFQKVLQGQEILPSQPYGRAFSGNEVQGNGRYGIFDNCQMPGSRNGWTAPAQDNSANLHPSIPSGQVSSPSSVFMFQQAVNPTPSCDYNNNNIMNQRMESKMQHRGLNPKVEFKGGKFASVSSYEPGFCGKTQGRTKSIGMFEHNQMDTSPSRDSVSARGDGQELTSSYKSSCRLFGFSLTQENHIANCK 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2086 684 Gene3D - 149 252 IPR015300 -
Acco06g2086 684 Pfam B3 DNA binding domain 151 252 IPR003340 GO:0003677
Acco06g2086 684 FunFam Auxin response factor 149 253 - -
Acco06g2086 684 Pfam Auxin response factor 278 358 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Acco06g2086 684 Gene3D - 314 387 - -
Acco06g2086 684 SUPERFAMILY DNA-binding pseudobarrel domain 144 255 IPR015300 -
Acco06g2086 684 MobiDBLite consensus disorder prediction 1 32 - -
Acco06g2086 684 SMART B3_2 151 253 IPR003340 GO:0003677
Acco06g2086 684 MobiDBLite consensus disorder prediction 9 32 - -
Acco06g2086 684 CDD B3_DNA 149 251 IPR003340 GO:0003677
Acco06g2086 684 ProSiteProfiles B3 DNA-binding domain profile. 151 253 IPR003340 GO:0003677
Acco06g2086 684 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 41 679 IPR044835 GO:0003677|GO:0006355|GO:0009725
Acco06g2086 684 FunFam Auxin response factor 314 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2086 Acco-ChrAcco06 15721564 15726332 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2086 38 516 B3 DNA Binding Superfamily AT5G60450 50.303 1.12e-143 436
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Acco06g2086 B3 7.1e-22 CL0405
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2086 06 15721564 15726332 Acco06g2086 06 15721564 15726332 ECH