Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2069 ATGGAACAAGTATTTAAAGCGTTTCTCCTCCTGCTTCTATACCAATCTCTGCTTGTATCAGCGCAGAGCTCTTATCGAGATTTTAGTTCCCTACAATCTCTCACAAAATCATGGCAGAACAAACCACCAAGTTGGGTGGGTTCAGATCCTTGTGGCAGTGGTTGGGAAGGAATTGGATGCACCAATTCCAGAGTGACCTCAATATTATTAGCAAGCATGAATTTGGTGGGCAGGCTGTCTTCAGATATCCAGTTATTATCTGAGTTAGACACTTTGGATCTCTCTTACAACAAGGGCCTGACAGGAACAATTCCGCAGGAGATTGGAAATTTGAGAAAATTAAAAACCCTTATATTGGTTGGTTGTAGTTTCTCTGGTAGTATTCCAGGTTCAATAGGATCTTTGCAGCAGCTGGATTTTCTAGCTCTGAACTTTAATCAGTTGAATGGAAACATTCCACCTACCATTGGCAATCTAACCAATATTAATTGGCTAGACCTTTCTGATAACCAGCTTGAAGGACCTATCCCAATCTCTAAAGCAGGAGTACTTGGACTTGAAAAGCTGCTTAAGGCAAAGCACTTTCACTTGGGAAACAATAGGCTCACAGGTGGAATCCCAGCTGACCTTTTTAGTTCAAATATGAGTCTGATCCATGTGCTTCTTAATAACAATCAACTAACTGGCAGTATTCCTAATACCATTGGGCGGGTGAACTCATTGGATGCAGTCCGTTTCGATGGGAACCAACTCAGTGGAAGCGTGCCTTCAACTATCAGCAATCTGAAAAATCTTAGTGATCTGTATTTGTCAAATAATAAGTTGAATGGTTCTCTGCCAGATCTTACTGGAATGAATCTTCTAGCCTATGTGGATCTGAGCAACAATACTTTCGATTCTTCTGTTATTCCTTCATGGGCTTCAAGTTTGCCGCTTATGACAACGTTAATGTTGGAGAACACCAACCTACAAGGGGAGATACCTGTCTCCTTATTTAACCAACCCAGTTTAGAGTCTGTGGTATTGAAGAGCAACCAGCTCAATGGCACCCTAGATATTGGCAATGCCAACAGCAACCGCTTGCAACTTATTGATTTGGAGAATAATACAATCACTGACTTCACGCAGAAAAACATAAACTATAAAGTTTCAGTAGTACTACTTCGCAACCGGATTTGCCTTGAAGTAGGAGCTTCTACTCAACGTTACTGCCAAGAACCCACATCCAGTTCCTTATATTCAACGCAGCCAAATAATTGCTCACCTCTTCCTTGCAGTTCTGGTCAGATTTCCAGTCCTAGCTGCAAATGTTCATATCCATACACTGGAACTCTATTTTCCATAGTTATTAGTTTCTCAGACCTTGGTAATGCAAGTTATTATAAAGAACTTGAGCAATCGCTGATGACTGCTTTTCAATCACAAAATCTCCCGGTGGATTCTGTTTCTCTAAGTAATCCGTTCAGGAATCCATCTACTGATTATCTTCAGTTGTCCCTGAAAGTCTTCCCCTCTTCAAGTGATCGATTCAATAGAACTGGAGTTTCAAATATTGCTTTTGCAATTAGCAGCCAGCTTCTTAAGTTCCCAAAATTTTTCCTTCCTTACTTCTTCATTGGTGATGTCTATGGATACGATGCAGATGGATCAAAGTCATCACATACAGGGCTTATAGTTGGTGTAGTAGTTGCTGTTGTGATCGTTCTGGTACTAGTACTCCTTGCAGTAATATATGCTGTACGTCAAAGGAAAAGAGCAAAAAGATCTGCTGAACTGAACCCTTTTGTAAACTGGGAACTGAACAAGAACAGCGGCGAGGCTCCTCAGTTAAAAGGAGCACGATGGTTTTCTTTAGAAGATCTAAAAAAATACACCAACAACTTCTCTGAAGACAACACTGTTGGATCTGGAGGCTATGGAAAGGTTTACCGAGCTGTTCTGCCCACTGGAGAACTAGTTGCCATCAAACGGGCTGCAAAAGAATCCATGCAGGGTTCTGGTGAGTTTAAAACTGAGATTGAACTTCTATCAAGGGTCCATCATAAGAATCTTGTCAGTCTTGCGGGTTTCTGTTTCGATAAAGGTGAACAAATGCTGGTGTATGAGTACATTCCAAACGGCACTTTAATGGATAGCCTTTCAGGAAAGTCTGAGATCAGAATGGATTGGATGAGAAGGCTTAAAGTAGCCTTAGGTGCAGCCAAGGGCTTGGCCTATCTTCATGAACTTGCTGACCCGCCAATCATACACAGGGACATAAAGTCAAGCAACATTCTACTCGATGAGCGCCTTAACGCAAAAGTCGCGGATTTTGGACTGTCCAAGCTTCTTGTTGATAGTGAAAGGGGCCATGTCACTACTCAAGTCAAAGGGACAATGGGTTACTTGGATCCTGAGTATTACATGACGCAGCAGTTGACTGAAAAAAGTGATGTATATAGCTTTGGAGTGCTGATGCTGGAACTAGTGACAGCAAGAAGGCCAATAGAGAAAGGGAAATATATAGTGAGAGAGGTACAAAATGTAATGGATACATCGAAAGAACTATTCAACCTCCATTCCATCATAGATCCATTCATCAACAAAGTGACTCCTCCACATGGTTTGGAGAAGTTTGTGGCCCTGGCAATGAGATGTGTCAGAGAATATGCAGCTCAGAGACCATCAATGGCTGAGGTGGTAAAGGAGATTGAGAATATAATGGAGCTTGCTGGATTGAACCCTACTTCTGAATCAGATCCACCCACAGAAGAAATCGACGTGGAGGCACGTGGCGGCAATCTACGTCATCCTTATGACCATAAAGAAGGTTTTAGCTATAGTGGGCCCTTTCCTTCAACAAAGGTAGAACCTCAGTGA 2859 0.4197 MEQVFKAFLLLLLYQSLLVSAQSSYRDFSSLQSLTKSWQNKPPSWVGSDPCGSGWEGIGCTNSRVTSILLASMNLVGRLSSDIQLLSELDTLDLSYNKGLTGTIPQEIGNLRKLKTLILVGCSFSGSIPGSIGSLQQLDFLALNFNQLNGNIPPTIGNLTNINWLDLSDNQLEGPIPISKAGVLGLEKLLKAKHFHLGNNRLTGGIPADLFSSNMSLIHVLLNNNQLTGSIPNTIGRVNSLDAVRFDGNQLSGSVPSTISNLKNLSDLYLSNNKLNGSLPDLTGMNLLAYVDLSNNTFDSSVIPSWASSLPLMTTLMLENTNLQGEIPVSLFNQPSLESVVLKSNQLNGTLDIGNANSNRLQLIDLENNTITDFTQKNINYKVSVVLLRNRICLEVGASTQRYCQEPTSSSLYSTQPNNCSPLPCSSGQISSPSCKCSYPYTGTLFSIVISFSDLGNASYYKELEQSLMTAFQSQNLPVDSVSLSNPFRNPSTDYLQLSLKVFPSSSDRFNRTGVSNIAFAISSQLLKFPKFFLPYFFIGDVYGYDADGSKSSHTGLIVGVVVAVVIVLVLVLLAVIYAVRQRKRAKRSAELNPFVNWELNKNSGEAPQLKGARWFSLEDLKKYTNNFSEDNTVGSGGYGKVYRAVLPTGELVAIKRAAKESMQGSGEFKTEIELLSRVHHKNLVSLAGFCFDKGEQMLVYEYIPNGTLMDSLSGKSEIRMDWMRRLKVALGAAKGLAYLHELADPPIIHRDIKSSNILLDERLNAKVADFGLSKLLVDSERGHVTTQVKGTMGYLDPEYYMTQQLTEKSDVYSFGVLMLELVTARRPIEKGKYIVREVQNVMDTSKELFNLHSIIDPFINKVTPPHGLEKFVALAMRCVREYAAQRPSMAEVVKEIENIMELAGLNPTSESDPPTEEIDVEARGGNLRHPYDHKEGFSYSGPFPSTKVEPQ 952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2069 952 FunFam Leucine-rich repeat protein kinase family protein 596 703 - -
Acco06g2069 952 Gene3D Ribonuclease Inhibitor 185 391 IPR032675 -
Acco06g2069 952 MobiDBLite consensus disorder prediction 917 936 - -
Acco06g2069 952 ProSiteProfiles Protein kinase domain profile. 628 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2069 952 ProSitePatterns Protein kinases ATP-binding region signature. 634 660 IPR017441 GO:0005524
Acco06g2069 952 Gene3D Ribonuclease Inhibitor 15 184 IPR032675 -
Acco06g2069 952 Gene3D Transferase(Phosphotransferase) domain 1 704 913 - -
Acco06g2069 952 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 704 913 - -
Acco06g2069 952 SUPERFAMILY L domain-like 32 400 - -
Acco06g2069 952 FunFam Leucine-rich repeat family protein 26 181 - -
Acco06g2069 952 PANTHER RECEPTOR-LIKE PROTEIN 55 36 900 - -
Acco06g2069 952 SMART serkin_6 628 901 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2069 952 ProSiteProfiles Leucine-rich repeat profile. 264 286 IPR001611 GO:0005515
Acco06g2069 952 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Acco06g2069 952 CDD STKc_IRAK 634 900 - -
Acco06g2069 952 Pfam Protein kinase domain 629 895 IPR000719 GO:0004672|GO:0005524|GO:0006468
Acco06g2069 952 Gene3D Phosphorylase Kinase; domain 1 598 703 - -
Acco06g2069 952 MobiDBLite consensus disorder prediction 906 952 - -
Acco06g2069 952 FunFam Leucine-rich repeat protein kinase family protein 182 281 - -
Acco06g2069 952 SUPERFAMILY Protein kinase-like (PK-like) 607 897 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2069 Acco-ChrAcco06 15600060 15607634 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2069 8 952 Receptor kinase-like Gene Family AT5G49760 54.048 0.0 956
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Acco06g2069 Pkinase 5.6e-49 CL0016