Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2065 ATGGCTTCTTCAAACCCTAAAAGACACTGGCCAAGCATGTTCAAGTCCAAGCCTGCTTCTTGCAACTCCCTCCACCACCAATGCAATAAGCATGACAACATCATGTCACCTCCAACCGGCCACAGAACCTCTTACGCATCAGGAGGTGATCAGGAGGAGAGAAGTGCAGAGCCAAAGCCAAGATGGAACCCAAAACCAGAGCAGATTCGGATACTGGAAGCCATATTCAACTCTGGGATGGTGAATCCTCCAAGAGACGAGATTAGGAAGATCAGAGCTAAACTCCAAGAGTATGGTCAAGTTGGTGATGCCAATGTCTTCTACTGGTTCCAGAACCGTAAATCCAGATCCAAACACAAGCTTCGTCACCTCCACAACTCTACTTCTAATGATAACTCCTCCCATCAAACCCAAAACCTAAACAACAATTCCTCTCCCAAACAAATCACACCACCACAACCTAATAAGCCATTAATGTCTAACATTGTCTTCTCCGACGACGTTTCTTCTGATACTGTACCTCCCATTTCTTCTACTCCACCGCCGCCGCCGCCAACGCCTCAGCCTTTCTTCTTTATTCCTGTTCCTGTTGCACAAGGTTTTTGCTTCTCTGAACTATCAAGTGTGGTTCAACCTGAAGGTCCTCGTGATCATCAACAACAAATCAACACTGTTGGTTCTTGCACCAATCTTCTGATTAACGAAATCATGAGCCCTTCACCGTCCAACAAGAATGACCAAGACAAGGTTATACAAATACAACAACACCCTCCAACTACTCACTCTATATTCCTTCCCGCCAGGACCACCACTGTTACTGTTCCATCTCCAATAATCTCTCAGATTGAAGGGACGGAAGAGGGTACGATGAAATCGACGGTGTTCATTAACGACGTCGCATTTGAAGTGGGTGTGGGACCCGTCAACGTGAGGGAGGCCTTCGGCGATGACGCGGTGCTCATCCACGTCTCCTCCGGTCAGCCAGTGCTCGTCGACGAATGGGGCATTACCCTCCAGCCTCTTCAGCACGGCGCATCTTATTACCTGATTTAG 1053 0.4786 MASSNPKRHWPSMFKSKPASCNSLHHQCNKHDNIMSPPTGHRTSYASGGDQEERSAEPKPRWNPKPEQIRILEAIFNSGMVNPPRDEIRKIRAKLQEYGQVGDANVFYWFQNRKSRSKHKLRHLHNSTSNDNSSHQTQNLNNNSSPKQITPPQPNKPLMSNIVFSDDVSSDTVPPISSTPPPPPPTPQPFFFIPVPVAQGFCFSELSSVVQPEGPRDHQQQINTVGSCTNLLINEIMSPSPSNKNDQDKVIQIQQHPPTTHSIFLPARTTTVTVPSPIISQIEGTEEGTMKSTVFINDVAFEVGVGPVNVREAFGDDAVLIHVSSGQPVLVDEWGITLQPLQHGASYYLI 350
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2065 350 Pfam Homeodomain 59 119 IPR001356 GO:0003677
Acco06g2065 350 CDD homeodomain 58 120 IPR001356 GO:0003677
Acco06g2065 350 MobiDBLite consensus disorder prediction 1 66 - -
Acco06g2065 350 Gene3D - 59 124 - -
Acco06g2065 350 SUPERFAMILY Homeodomain-like 56 123 IPR009057 -
Acco06g2065 350 PANTHER WUSCHEL-RELATED HOMEOBOX 9 1 350 IPR044557 GO:0003700|GO:0050793
Acco06g2065 350 MobiDBLite consensus disorder prediction 118 189 - -
Acco06g2065 350 MobiDBLite consensus disorder prediction 127 174 - -
Acco06g2065 350 FunFam WUSCHEL-related homeobox 11 59 126 - -
Acco06g2065 350 SMART HOX_1 57 124 IPR001356 GO:0003677
Acco06g2065 350 ProSiteProfiles 'Homeobox' domain profile. 55 120 IPR001356 GO:0003677
Acco06g2065 350 MobiDBLite consensus disorder prediction 1 50 - -
Acco06g2065 350 MobiDBLite consensus disorder prediction 175 189 - -
Acco06g2065 350 MobiDBLite consensus disorder prediction 52 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2065 Acco-ChrAcco06 15581517 15583230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2065 1 350 Wox Gene Family AT2G33880 41.985 3.28e-76 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Acco06g2065 Homeodomain 1.3e-14 CL0123