Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2063 ATGGTTTTGGCCTCCCAGACAGATCTTCCTTTCAACGAGAACGACTCACAAGACATGGTCATATACCAAGTCCTCCACGAGGCCAATTCTCTTCACACAACCACCACCACCACCTCCTCCTCCTCCTCCTCCGCCGCCGCCGCCAACGCCAACGTCGCCGCATTCATCCCGCAGAGGCAACAGGCCGCCGTACAGAGCGGGCTAGAGCCGACCAGGACCGTCGGAAAGAAGCATTACAGAGGCGTAAGGAGGCGGCCGTGGGGGAAGTACGCGGCGGAGATCCGAGACTCAAACCGGCACGGAGCACGCGTGTGGCTAGGCACGTTCGAAACCGCGGAGGAGGCCGCCATGGCTTACGACCGAGCGGCTTTTAGAATGAGAGGCTCTAAGGCTTTGCTCAATTTTCCAGCCGAAATCGTAGCTTCTTCCATGCAAATGTCTTTCAATTCTAATCAACCTAATAATAATTTGAGCTCCTCAGGAAGATTTTATAATCAAGATTCAGATTCAAGTGCTAGCAGCAGCTCCGGCGTTAATTCCTTTGGAACAAACAGAACCTTGTCAGAAACCACAAGTAGCACAGACAGTTAG 591 0.533 MVLASQTDLPFNENDSQDMVIYQVLHEANSLHTTTTTTSSSSSSAAAANANVAAFIPQRQQAAVQSGLEPTRTVGKKHYRGVRRRPWGKYAAEIRDSNRHGARVWLGTFETAEEAAMAYDRAAFRMRGSKALLNFPAEIVASSMQMSFNSNQPNNNLSSSGRFYNQDSDSSASSSSGVNSFGTNRTLSETTSSTDS 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2063 196 PRINTS Ethylene responsive element binding protein signature 79 90 IPR001471 GO:0003700|GO:0006355
Acco06g2063 196 PRINTS Ethylene responsive element binding protein signature 102 118 IPR001471 GO:0003700|GO:0006355
Acco06g2063 196 SUPERFAMILY DNA-binding domain 78 138 IPR016177 GO:0003677
Acco06g2063 196 ProSiteProfiles AP2/ERF domain profile. 78 136 IPR001471 GO:0003700|GO:0006355
Acco06g2063 196 CDD AP2 77 137 IPR001471 GO:0003700|GO:0006355
Acco06g2063 196 FunFam Ethylene-responsive transcription factor 2 77 138 - -
Acco06g2063 196 MobiDBLite consensus disorder prediction 151 196 - -
Acco06g2063 196 SMART rav1_2 78 142 IPR001471 GO:0003700|GO:0006355
Acco06g2063 196 Pfam AP2 domain 78 128 IPR001471 GO:0003700|GO:0006355
Acco06g2063 196 PANTHER DNA-BINDING DOMAIN 18 173 IPR044808 GO:0003700|GO:0009873
Acco06g2063 196 Gene3D AP2/ERF domain 77 138 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2063 Acco-ChrAcco06 15557644 15558234 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2063 9 154 AP2-EREBP Transcription Factor Family AT5G47220 48.299 1.06e-41 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco06g2063 AP2 2.6e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2063 06 15557644 15558234 Acco06g2063 06 15557644 15558234 ECH