Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2062 ATGGATGTTCATAACAATCAAGATTCAGCTTCTGGAGGCATTCTCGAGAACGTGTGGGCCAAAATCACTAACAACGATAATGATGGATCATCACAATGGGAAGAACTGCCTAATCTGGGTGAAAGAGAAGGGTCTATGGAAGTTTTAAGAAGGCTTCCTAGTTTAGGAAGATGGATATCAATGGGAGCTGATTTCTGGGAAGAAATCTTAGATGGGTTTCCAGCTTGTAGCAGTAATATTGATTCAGAAATTTGCAGAGCTTTTGAGTGCAATAAGAAGAAGGTTGAAGAAGAAGAAACAGTGAGAATGAAAACAGAGAAAAGGGTATCTGCAAAACATTACAGAGGAGTGAGAAGAAGGCCATGGGGGAAATATGCAGCAGAAATTAGAGACTCATCAAGGAAAGGAGCTAGGGTTTGGCTGGGGACTTATGACACAGCTGAGGAAGCAGCTTTGGCTTATGATAGGGCTGCTTTGAGAATTAGAGGACCTAAGACATACCTGAATTTCGCAATTGAGACTGTTTCAAAGGCCTTAGGATTTGACCAGAAGAAAGGAAATTTCTGCAGCTCCAGAAGAAAGAGAAGGTGTAGTGAGAGAGATGAAGTTGTTGGTGTCATGATGAATAAAGAAACTCCTGCAAAGAAGAAGATGTCAAGCTTGGGAGGGATGATAGAGAATGAAGATGATAATGTTTTTGAGTTTCAGGACTTGGGAATTGATTATTTGGAAAGTTTGTTATCTTCCTTTTGA 753 0.4037 MDVHNNQDSASGGILENVWAKITNNDNDGSSQWEELPNLGEREGSMEVLRRLPSLGRWISMGADFWEEILDGFPACSSNIDSEICRAFECNKKKVEEEETVRMKTEKRVSAKHYRGVRRRPWGKYAAEIRDSSRKGARVWLGTYDTAEEAALAYDRAALRIRGPKTYLNFAIETVSKALGFDQKKGNFCSSRRKRRCSERDEVVGVMMNKETPAKKKMSSLGGMIENEDDNVFEFQDLGIDYLESLLSSF 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2062 250 PRINTS Ethylene responsive element binding protein signature 114 125 IPR001471 GO:0003700|GO:0006355
Acco06g2062 250 PRINTS Ethylene responsive element binding protein signature 137 153 IPR001471 GO:0003700|GO:0006355
Acco06g2062 250 PANTHER DNA-BINDING DOMAIN 96 243 IPR044808 GO:0003700|GO:0009873
Acco06g2062 250 Pfam AP2 domain 113 163 IPR001471 GO:0003700|GO:0006355
Acco06g2062 250 ProSiteProfiles AP2/ERF domain profile. 113 171 IPR001471 GO:0003700|GO:0006355
Acco06g2062 250 SMART rav1_2 113 177 IPR001471 GO:0003700|GO:0006355
Acco06g2062 250 FunFam Ethylene-responsive transcription factor 2 112 173 - -
Acco06g2062 250 CDD AP2 112 172 IPR001471 GO:0003700|GO:0006355
Acco06g2062 250 SUPERFAMILY DNA-binding domain 113 172 IPR016177 GO:0003677
Acco06g2062 250 Gene3D AP2/ERF domain 112 173 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2062 Acco-ChrAcco06 15554257 15555009 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2062 12 250 AP2-EREBP Transcription Factor Family AT4G18450 35.390 1.29e-36 129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Acco06g2062 AP2 1.1e-16 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2062 06 15554257 15555009 Acco06g2062 06 15554257 15555009 ECH