Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2054 ATGGGCTCAGGTGATTGGTTTAAGACAATAATTAGCTTAAGAAAATCAAAAGAAGGCAATTCAAAGAAAGCAAAGGGATCCAAGAAACAAACTGCATTGAAGTTGAAGAATTATACAGGAAAAGATTCAAGCAATATAACAAATGGCACTAAGGATTCAAATCTTGTATCAACTGGGGTATCAATTGAAACTGTTGCTGCAACGATGATCCAGACAGCATTCCGGGCTTATTTGGCTAGAAAATCTCTACGGCGCTTGAAAGGTTGTGCAAAACTTAAGGTCCAAATACAAGGTCATACTGTTAAAGACCAAGCCAACAGAGCTGTAAGTCATATTCATAAATGGAGCATGATTCAGGCTGAGGTTAGAGCTCGCCGAATCTGTATGGTCACTGAAGACAGGATCAGGCGAAAGAAACTTGAATCTCAAATTAAACTTGAGGCAAAGCTCCATGATTTTGAGGTGGAATGGAGTGGTGGTTCTGAAACCATGGAGGAAACCTTGGCAAGGATACATCATAGAGAAGAAGCCTCCGTTAAGCGGGAAAGAGCCATGGCCTATGCCTTTTCTCATCAGTGGAGGGCTAACTCTAACCAAGGGCTCGGTCACTATGAACTTAACAAAGCTAATTGGGGTTGGAGCTGGAAGGAACGCTGGATTGCTGCTCGTCCGTGGGAAAGCCGTGTCATTGAGAAGCAAGTTAACCCCAAGAAAGCTCAAACTAGGCAGCCAAAGAAGGTTCAAAAGGACAAGAACCCATCAACACCGAAAACACCTGTTTCAGTTAAACCTCCTGTGACTAATGCAAAAAAAGTGACTTCAAAACCTAGGCGATTATCTTATCCTGCCTCACAGAAAACTGTGGTCCATGAGGAAAGCAATAAATCCTTACCTGTTACTGTATGA 906 0.4238 MGSGDWFKTIISLRKSKEGNSKKAKGSKKQTALKLKNYTGKDSSNITNGTKDSNLVSTGVSIETVAATMIQTAFRAYLARKSLRRLKGCAKLKVQIQGHTVKDQANRAVSHIHKWSMIQAEVRARRICMVTEDRIRRKKLESQIKLEAKLHDFEVEWSGGSETMEETLARIHHREEASVKRERAMAYAFSHQWRANSNQGLGHYELNKANWGWSWKERWIAARPWESRVIEKQVNPKKAQTRQPKKVQKDKNPSTPKTPVSVKPPVTNAKKVTSKPRRLSYPASQKTVVHEESNKSLPVTV 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2054 301 ProSiteProfiles IQ motif profile. 63 91 IPR000048 GO:0005515
Acco06g2054 301 Gene3D iswi atpase 62 87 - -
Acco06g2054 301 MobiDBLite consensus disorder prediction 231 301 - -
Acco06g2054 301 PANTHER IQ-DOMAIN 5-RELATED 1 277 - -
Acco06g2054 301 MobiDBLite consensus disorder prediction 278 301 - -
Acco06g2054 301 Pfam IQ calmodulin-binding motif 65 84 IPR000048 GO:0005515
Acco06g2054 301 SMART iq_5 62 84 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2054 Acco-ChrAcco06 15471239 15473799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2054 1 284 IQD Protein Family AT2G33990 51.211 6.83e-86 256
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2054 06 15471239 15473799 Acco06g2054 06 15471239 15473799 ECH