Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2049 ATGAGTCAGTGGAGTTGTGAGAACGAGAAGCAATTTCAAGTTGCTCTATTGTATTATCCAGAGGATTTTCCCAATCGATGGGAGAAGATCGCGGAGGTGGTCGACTCCTCTAAGGAAATGGTTTACCAACGGTATCAAATTCTCCAAGTTGAATTGGGTCAGGTTCTGCCACCGCAATACACAAACTCTTCCACGAATAATCAACCCCACAAGAATAATAAAGGCACCACTTGGACTTATGAAGAACATGCATTGTTCTTGCTGGGAGAGCAGAAATATGGCAAGGGACACTGGAAGAACATCTCTGAAAAGGCGGTGGTGACGAGGAATGCAACTCAAGTGGCAAGCCATACTCAAAAGTTTTATATTCGCCAAAAAGAAAAGGAGACCATGGTGCATAGTAGAGGAAGCATCCATGATTTCACTTTGGCAAACTACCCACCAGAATATCTAAATGATCTTCTTTCTTCACGTCCTCACTTGATGCCTGGCTCATGCATGATAATGCAACAGCCCAACTCATCAATTCGTAGTCATCTTCCACTACATAATTACCATCACTCACTGCCGATGACTCAATTAGGAACTCAAATTCCTTCAACTCTTTATCAATCCCATCAAGATGCCTTACTAGCGAATTATGATCTTCAACTGCACCAGTTATCAACACCAATGAATCAAGTAGGCCCACAAAATCCTTCAGGAGTTCAATTGCAAAACCCATGTCATCAACCTAACTCACAAGTTGTGAGTCATTCACTGCCAATGAATCAAGCGGATCAGTCTGAGTCACAATATCCATATCATATTATTCTTCCACAGCAAAATTTACCACTGAATCATCAGTTTACGGCACAGAATTACCAGTGCTGA 873 0.4192 MSQWSCENEKQFQVALLYYPEDFPNRWEKIAEVVDSSKEMVYQRYQILQVELGQVLPPQYTNSSTNNQPHKNNKGTTWTYEEHALFLLGEQKYGKGHWKNISEKAVVTRNATQVASHTQKFYIRQKEKETMVHSRGSIHDFTLANYPPEYLNDLLSSRPHLMPGSCMIMQQPNSSIRSHLPLHNYHHSLPMTQLGTQIPSTLYQSHQDALLANYDLQLHQLSTPMNQVGPQNPSGVQLQNPCHQPNSQVVSHSLPMNQADQSESQYPYHIILPQQNLPLNHQFTAQNYQC 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2049 290 SMART sant 74 124 IPR001005 -
Acco06g2049 290 MobiDBLite consensus disorder prediction 227 250 - -
Acco06g2049 290 SUPERFAMILY Homeodomain-like 72 127 IPR009057 -
Acco06g2049 290 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 70 126 IPR017930 -
Acco06g2049 290 Gene3D - 76 127 - -
Acco06g2049 290 SUPERFAMILY Homeodomain-like 2 48 IPR009057 -
Acco06g2049 290 Gene3D - 1 55 - -
Acco06g2049 290 PANTHER TRANSCRIPTION FACTOR KUA1 2 251 - -
Acco06g2049 290 ProSiteProfiles Myb-like domain profile. 70 122 IPR001005 -
Acco06g2049 290 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Acco06g2049 290 CDD SANT 77 117 IPR001005 -
Acco06g2049 290 NCBIfam myb-like DNA-binding domain, SHAQKYF class 73 125 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2049 Acco-ChrAcco06 15450191 15451181 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Acco06g2049 Myb_DNA-binding 1.7e-06 CL0123