Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2013 ATGGAGCGGTCGAGCCGAGCCAGCCGCTTTCCCCGGCCCGTCTCGGACTCGGTGGGTTCCTCTCAACGTCACGCGCCCTTCCCCGGCGACCCAACGCCTCTACCGTACCGCATTATCCCACGCTTTCCCCTTCTCTCGTGCTCGCCGTTTTTTCTCGGGTCGCCTGTAAACCATCCGCGCTCGATGTCCGTCCGCGAAGATTGTTGGAGCGAGGAAGCTACCTCCACCCTCGTCGACGCTTGGGGCCGCCGTTATATACAGGTCAACCGCGGCAACCTCCGTCTGAAGGATTGGCAGGACGTTGCCGACGCTGTCAACGCTCTGCATGGTCACACCAAGAAGACGCATAGGACGGATGTTCAGTGCAAGTACCGAATCGATACCATTAAGAAGAAGTATAAGGTTGAGAAGAATAGGGTTTCCTCTCCCAACGGGGCTCCTTCCACTTGGCCCTTCTTCGATCGCTTAGACATTTTGATTGGGCCTTCTTTGAGTGCGAAAAAGGCGGTGCCTTCGCCTCCGGTGGTACTTTCTTTGCCGTATCATAAAACCCCGTCCCCTGCATCTACGGTGCCGACGAAGGCCTGGGCGCTGCCGCAGAAGCGGCAGGCGGAGGCACTATTAGACGATGGATTCTTCATGAGGAATTATTCAGCCGCGGCAGCTGCAGCAGGGGCTGATGAGGATGAGGATGAGGACTATGAGGACGAGGAAGAAGATGAAGATGAAGATGAAGAGAGGGCAAGCGAGGTTGAGGAAGAAGAGAGGGAGAAGGAAGGGATGAGGAGCTTGGCAAAAGCAATAGTGAGGTTTGGGAAAGTTTATGAGAGGACGGAGAGAGAAAACTTGAGGCAAATGGTGGAATTGGAGAAACAGAGGATGCGGTTTGATAAAGATCTGGAAGTGCAAAGGATGAATATGTTCATGGACACGCAGTTTCAGTTGGGGAGGATCAAACGAGGGAAGCATTCTGGGTCTACTGGTGAGTTAGAACTTTCTCCTTTTCTTCTCAAGTACTGGGTTGATGGCGTATCATATCCTGCAAGAAAGCATATTTGCAAGCTGGGAGGAAGGGGATCTCATCTGAATCAGAACAGTAGCTCCTTGATGCAACTGTTGGGTTTTTATCAGATATGTACAGCTAGCCAAGTGCGCAAAGCTTTGATAGTGGTTTCTGATTGTAAGGCCTTTTTGGGAACCTGTTTCTTTAAGTTTAAGAATCTTAAGCTGCTGATAGGGATGCCATAA 1248 0.5168 MERSSRASRFPRPVSDSVGSSQRHAPFPGDPTPLPYRIIPRFPLLSCSPFFLGSPVNHPRSMSVREDCWSEEATSTLVDAWGRRYIQVNRGNLRLKDWQDVADAVNALHGHTKKTHRTDVQCKYRIDTIKKKYKVEKNRVSSPNGAPSTWPFFDRLDILIGPSLSAKKAVPSPPVVLSLPYHKTPSPASTVPTKAWALPQKRQAEALLDDGFFMRNYSAAAAAAGADEDEDEDYEDEEEDEDEDEERASEVEEEEREKEGMRSLAKAIVRFGKVYERTERENLRQMVELEKQRMRFDKDLEVQRMNMFMDTQFQLGRIKRGKHSGSTGELELSPFLLKYWVDGVSYPARKHICKLGGRGSHLNQNSSSLMQLLGFYQICTASQVRKALIVVSDCKAFLGTCFFKFKNLKLLIGMP 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2013 415 MobiDBLite consensus disorder prediction 225 252 - -
Acco06g2013 415 Gene3D - 69 135 - -
Acco06g2013 415 Coils Coil 234 254 - -
Acco06g2013 415 MobiDBLite consensus disorder prediction 1 32 - -
Acco06g2013 415 FunFam trihelix transcription factor ASIL2 69 135 - -
Acco06g2013 415 Pfam Myb/SANT-like DNA-binding domain 66 157 IPR044822 -
Acco06g2013 415 MobiDBLite consensus disorder prediction 222 260 - -
Acco06g2013 415 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 57 322 IPR044823 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2013 Acco-ChrAcco06 15136517 15140165 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2013 59 327 Trihelix Transcription Factor Family AT3G14180 30.618 1.54e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Acco06g2013 Myb_DNA-bind_4 1.9e-22 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2013 06 15136517 15140165 Acco06g2013 06 15136517 15140165 ECH