Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2005 ATGAAGAAGGAGCAACTACACCATAAGTTATATTCAAAGACCATTCACTGCTTTTTGCTGTTTGATTTCTTTGTACTCTTTGCACAGCTTCTTATGCGATTAGATCATGTTCCTTCATCAGTTTCTGGGTTTCTTCCTCATCTTCTCCTCACCTCCTTTCCCTTTAGAATAAAAACAATGTCGTCATCAGAAGGATTTCAGATAGAAGACAAGAAGAATAACTGGTGTACTGATCAGGAAGACAATTCATTGGGATCTTCTCATCAGACATGTTCGTCCTTTGACTTGAATGAAGGAGCAAGCATGGAAGAAGAAGAAGACAACAATGGAACAGACTGTGATATGGTCATGGGTGGGGAGGAGAATGAAGATGATGATGAGAAAGAGAAGAATAATGAAGAAGAAGGTGATTCAACTAATAATAATAAAAGAAGCACAACGAGGGAAGAAGTGAATGAAAGAAGAAGAACAGTGAGACAGTATGTAAGATCAAAGATGCCTCGCCTTCGATGGACTCCTGAACTTCATCTCTCATTTGTTCAAGCTGTTGAAAGGCTTGGTGGTCAAGAGAGAGCCACACCCAAGTTGGTGCTTCAGCTAATGAATGTGAGAGGGCTCAGCATTGCTCATGTCAAGAGTCACTTGCAGATGTATCGAAGCAAGAAACTTGATGAGACCGGCCAAGTTGTTGGTGGAAACAGATGGAGACAACGGGAAGCTGTTAATTATTCTCAGAGATGGATATCGTCGCATTATTATCAGTGTGGGAGGCCTCCTCATGAATATTTGAAGATGGGAAACGGCGGAATCATCCTCGCAACTAATTGCAACGACCATACAAAACCTACCGATTCATCATGGCAGCAAATACAGTGGCACTTGAATCGTCAACCTGATCTGAAACTGCAACAGAAAATGTGGCCTCCATTAATGGAGAACACGAACGCTCATCAATGGAACTTGAATCATAATGCCACCTTAAAACCAGATCCACATCACTCTAACTTCAATCATAGTCTCAAGCAGCTAGATTTTCAGCCTCCGTTTCGGATCCAGCTGCGGGAAGAAAAGCAATGGCTGCCTGATTTGCAGTTGGGGCTGAGTCTGGGAGGTGGCAAAGACATCCAAGAAATTAGCACTGAGCTTTCACTTTCTTAG 1158 0.424 MKKEQLHHKLYSKTIHCFLLFDFFVLFAQLLMRLDHVPSSVSGFLPHLLLTSFPFRIKTMSSSEGFQIEDKKNNWCTDQEDNSLGSSHQTCSSFDLNEGASMEEEEDNNGTDCDMVMGGEENEDDDEKEKNNEEEGDSTNNNKRSTTREEVNERRRTVRQYVRSKMPRLRWTPELHLSFVQAVERLGGQERATPKLVLQLMNVRGLSIAHVKSHLQMYRSKKLDETGQVVGGNRWRQREAVNYSQRWISSHYYQCGRPPHEYLKMGNGGIILATNCNDHTKPTDSSWQQIQWHLNRQPDLKLQQKMWPPLMENTNAHQWNLNHNATLKPDPHHSNFNHSLKQLDFQPPFRIQLREEKQWLPDLQLGLSLGGGKDIQEISTELSLS 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2005 385 MobiDBLite consensus disorder prediction 79 158 - -
Acco06g2005 385 NCBIfam myb-like DNA-binding domain, SHAQKYF class 167 222 IPR006447 GO:0003677
Acco06g2005 385 FunFam Myb family transcription factor 165 223 - -
Acco06g2005 385 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 163 223 IPR017930 -
Acco06g2005 385 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 141 308 IPR046955 GO:0003700
Acco06g2005 385 Gene3D - 166 223 - -
Acco06g2005 385 Pfam Myb-like DNA-binding domain 169 219 IPR001005 -
Acco06g2005 385 MobiDBLite consensus disorder prediction 133 158 - -
Acco06g2005 385 SUPERFAMILY Homeodomain-like 165 221 IPR009057 -
Acco06g2005 385 MobiDBLite consensus disorder prediction 79 97 - -
Acco06g2005 385 MobiDBLite consensus disorder prediction 99 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2005 Acco-ChrAcco06 15074450 15078836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2005 158 228 G2-like Transcription Factor Family AT2G42660 77.465 2.53e-33 123
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Acco06g2005 Myb_DNA-binding 8.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Acco06g2005 06 15074450 15078836 Acco06g2005 06 15074450 15078836 ECH