Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2003 ATGGGTTCTAGATGGGGCTCATATGTATTTTGGAGAAGAATTTATTGTGCTTTAATCTGTCTGTGGGGTATTCGTGCATGTTGGTCGCTTAATGATGAAGCAATGGCTTTGTTAAAGTTCCGGGATAGAATAGATTCTGATCCTTATGGAGCTTTGGCTAACTGGAAACCAGATGATCTTGATCCTTGTGACTGGGTGGGTGTTCAATGTATTGAAAATTCAGTACAAATGCTGAACTTAAGTGGGCTATCTTTGGAAGGTACACTGGCTCCTGAGCTTGGGAAACTAAGCAACTTAAGATATCTTGTGTTATGTAAAAATAAGTTTTCTGGACTCATTCCTCAAGAACTTGGAGATTTGACTAAGCTGGAGTTGTTGGATTTGAGGGACAATAGCTTGACTGGAAGTGTTCCAGCAGAAATTGGCAAGATGTTGTTCCTAAAAGAATTGTTCCTTTTTGTCAACAACCTTGAACACAATGTTCCTCAAGACCTCGGGAAGCTTGAATTACTCTCTAAAACACAATTGGTTGACGATCACACATCTCATGAGGTGGCTGAAATTTGTAGCATGAATAGAAAACTTGGACATTGGTTCAAGCTTCAGAAGTGCCATGGATATAAAAAGAATTGTTTGGACAATGAGCCAACAATTGCTCAAATAAGCCGTAAATTATTGGATCAGTCCAGTAATCTTGCAGCTTCGCCTTTTAGTGGTGGGCCTACAAAACAGATCATTAGTCTCCCAACTACATTGAGTAGTGGAGCCTTTCCGGCTATATCAAACACCAGTCAAAATCCGTCACCTGTGCCATTGCCTTCACCTGCTTCTTCTGGAAATGAATCAAATCAACAACCTCCAGCTAAAGATAAGGCTTCTGGAGATGCTTGGAAAGCAGTAAAAGCAGTTAGGCCATGGAAGACAGGATTAAGTGGACAGTTACAGAAAGCTTTTGTGACAGGTGTCCCTAAGCTAAATCGAGCAGAGTTGGAGGTAGCTTGTGAGGGTTTCAGTAATATTGTTATAAACTTTCCTGAAGTTACCGTATACAAGGGAACTCTATCCGATGGAACCGAGATTGCTGTTTCATCGACTGTGATTGCTTCGGCCCAAGACTGGTCAAAGAATATGGAGACTGACCATCGGAAAAAGATCGATACCATGTCTCGGATAAAACATAAGAACTTTATTAATCTTATTGGCTACTGTGACGAGGAAGAGCCATTTACCAGGATGATGGTGACTGAGTATGTTCCAAATGGATCCCTATTTGAGCATTTGCATGTACATGCACCATGA 1299 0.4103 MGSRWGSYVFWRRIYCALICLWGIRACWSLNDEAMALLKFRDRIDSDPYGALANWKPDDLDPCDWVGVQCIENSVQMLNLSGLSLEGTLAPELGKLSNLRYLVLCKNKFSGLIPQELGDLTKLELLDLRDNSLTGSVPAEIGKMLFLKELFLFVNNLEHNVPQDLGKLELLSKTQLVDDHTSHEVAEICSMNRKLGHWFKLQKCHGYKKNCLDNEPTIAQISRKLLDQSSNLAASPFSGGPTKQIISLPTTLSSGAFPAISNTSQNPSPVPLPSPASSGNESNQQPPAKDKASGDAWKAVKAVRPWKTGLSGQLQKAFVTGVPKLNRAELEVACEGFSNIVINFPEVTVYKGTLSDGTEIAVSSTVIASAQDWSKNMETDHRKKIDTMSRIKHKNFINLIGYCDEEEPFTRMMVTEYVPNGSLFEHLHVHAP 432
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2003 432 MobiDBLite consensus disorder prediction 257 296 - -
Acco06g2003 432 PANTHER PROTEIN MALE DISCOVERER 2 298 429 - -
Acco06g2003 432 SUPERFAMILY Protein kinase-like (PK-like) 348 428 IPR011009 -
Acco06g2003 432 Pfam Protein tyrosine and serine/threonine kinase 348 430 IPR001245 GO:0004672|GO:0006468
Acco06g2003 432 SUPERFAMILY L domain-like 27 175 - -
Acco06g2003 432 FunFam Leucine-rich repeat receptor-like protein kinase 30 186 - -
Acco06g2003 432 Gene3D Ribonuclease Inhibitor 31 193 IPR032675 -
Acco06g2003 432 Pfam Leucine rich repeat N-terminal domain 31 70 IPR013210 -
Acco06g2003 432 Gene3D Transferase(Phosphotransferase) domain 1 347 432 - -
Acco06g2003 432 FunFam Inactive receptor-like serine/threonine-protein kinase 309 417 - -
Acco06g2003 432 MobiDBLite consensus disorder prediction 275 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2003 Acco-ChrAcco06 15035877 15040128 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2003 29 428 Receptor kinase-like Gene Family AT2G35620 25.416 2.44e-28 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Acco06g2003 PK_Tyr_Ser-Thr 2e-08 CL0016