Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Acco06g2002 ATGTTGACCCTACCAATTGAAGATAAAGAAAATTCAAAGAATTCCGAATTGTCATTTGATGCTGATCCTGAAGCTAACGTGTATTGCTTTGGGAAATTGCTATTTGAAATCATTTCTGGAAAATTACCGGACTGCAAAGAACAAGAACAGCTTGAGAAATTGGCCGGTGACTATTCCAATGGTAAGAGAAGCATCAGTTATATGATCGATCCTTCCCTTAACTCCTTCAGAGAGAGAGAACTTGATGTGATTTGTGAGTTGATCCATCAATGCACCCAACCTAATCCAAGTTTGAGACCCACAATGAAGGACATAACCTACAAATTAAGGGATGTTATTGGTTTTTCACCCGACATGGCAGCCCCAGGACTTTCTCCACTCTGGTGGGCTGAACTGCAGATTTTATCAGAAGAGGCAACATAA 423 0.4043 MLTLPIEDKENSKNSELSFDADPEANVYCFGKLLFEIISGKLPDCKEQEQLEKLAGDYSNGKRSISYMIDPSLNSFRERELDVICELIHQCTQPNPSLRPTMKDITYKLRDVIGFSPDMAAPGLSPLWWAELQILSEEAT 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Acco06g2002 140 PANTHER PROTEIN MALE DISCOVERER 2 9 137 - -
Acco06g2002 140 SUPERFAMILY Protein kinase-like (PK-like) 21 113 IPR011009 -
Acco06g2002 140 Gene3D Transferase(Phosphotransferase) domain 1 10 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Acco06g2002 Acco-ChrAcco06 15028161 15028731 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Acco06g2002 24 109 Strubbelig Receptor Gene Family AT4G22130 28.571 5.49e-09 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Acco06g2002 None None None